RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 ASB18Q6ZVZ8 466 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 HIST3H2AQ7L7L0 130 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 NANOGNBQ7Z5D8 188 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 C9orf40Q8IXQ3 194 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 SLC25A45Q8N413 288 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 FAM71CQ8NEG0 241 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 OR14A16Q8NHC5 309 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 C1orf216Q8TAB5 229 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 HIST1H2ACQ93077 130 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 FRMD6Q96NE9 622 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 OR14A2Q96R54 314 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 ELF4Q99607 663 aaPredicted RBP8.15□□□□□ -1.11
CCDC66-216ENST00000476142 NUDT22Q9BRQ3 303 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 TBL1XR1Q9BZK7 514 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 SLC19A3Q9BZV2 496 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 SRA1Q9HD15 236 aaKnown RBP8.15□□□□□ -1.11
CCDC66-216ENST00000476142 GRHPRQ9UBQ7 328 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 PCDHGB7Q9Y5F8 929 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 IGHV3-20A0A0C4DH32 117 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 FAM240BA0A1B0GVZ2 78 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 NUDT21O43809 227 aaKnown RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 RPP14O95059 124 aaKnown RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 IGKV3-11P04433 115 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 DCNP07585 359 aaKnown RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 CD53P19397 219 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 RAB3BP20337 219 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 RPS4XP62701 263 aaKnown RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 CDK5R1Q15078 307 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 TOMM34Q15785 309 aaPredicted RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 LANCL3Q6ZV70 420 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 MS4A15Q8N5U1 240 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 DAZLQ92904 295 aaKnown RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 ADIPOR1Q96A54 375 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 SMIM19Q96E16 107 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 SHDQ96IW2 340 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 LRFN5Q96NI6 719 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 SOSTQ9BQB4 213 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 TMEM43Q9BTV4 400 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 ALG12Q9BV10 488 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 BEX2Q9BXY8 128 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 RAB33BQ9H082 229 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 PCED1AQ9H1Q7 454 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 SYNDIG1Q9H7V2 258 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 RNF121Q9H920 327 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 NEK6Q9HC98 313 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 MMP25Q9NPA2 562 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 FGF21Q9NSA1 209 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 NPAP1Q9NZP6 1156 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 NLKQ9UBE8 527 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 CTSFQ9UBX1 484 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 TEKT2Q9UIF3 430 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 PCDH15Q96QU1 1955 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 IGKV3D-11A0A0A0MRZ8 115 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 H3BMH7 237 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 ARPC3O15145 178 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 LYRM1O43325 122 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 NDUFB5O43674 189 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 SERPINA3P01011 423 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 POU3F3P20264 500 aaPredicted RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 CXCR1P25024 350 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 EGR4Q05215 589 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 DMWDQ09019 674 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 GGTLC2Q14390 218 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 EBPQ15125 230 aaKnown RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 SLC29A4Q7RTT9 530 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 TPRA1Q86W33 373 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 LRRC28Q86X40 367 aaPredicted RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 OR6F1Q8NGZ6 308 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 TAAR8Q969N4 342 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 SLC25A36Q96CQ1 311 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 ORAI1Q96D31 301 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 MVB12AQ96EY5 273 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 LPAR4Q99677 370 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 VN1R1Q9GZP7 353 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 CHRNA10Q9GZZ6 450 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 BRD7Q9NPI1 651 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 RXFP3Q9NSD7 469 aa8.14□□□□□ -1.11
CCDC66-216ENST00000476142 MRPS7Q9Y2R9 242 aaKnown RBP8.14□□□□□ -1.11
CCDC66-216ENST00000476142 CACNA1IQ9P0X4 2223 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 A0A1B0GX78 115 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 TCRBV16S1A1N1A0A5B0 115 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 TMEM221A6NGB7 291 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 TVP23AA6NH52 213 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 C11orf98E9PRG8 122 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 EEF1E1O43324 174 aaKnown RBP8.13□□□□□ -1.11
CCDC66-216ENST00000476142 GLCEO94923 617 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 CD14P08571 375 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
CCDC66-216ENST00000476142 GLB1P16278 677 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 THBS2P35442 1172 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 CAPZA2P47755 286 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 RAB25P57735 213 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 LTBQ06643 244 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 RPL18Q07020 188 aaKnown RBP8.13□□□□□ -1.11
CCDC66-216ENST00000476142 CDONQ4KMG0 1287 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 PXKQ7Z7A4 578 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.13□□□□□ -1.11
CCDC66-216ENST00000476142 RDH10Q8IZV5 341 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 SYS1Q8N2H4 156 aa8.13□□□□□ -1.11
CCDC66-216ENST00000476142 SDR16C5Q8N3Y7 309 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms