RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 C22orf39Q6P5X5 142 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 PRR18Q8N4B5 295 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 CYB5D2Q8WUJ1 264 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 FAM71F1Q96KD3 344 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 PCDHGA5Q9Y5G8 931 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 EVPLQ92817 2033 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 NPIPA7E9PJI5 369 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 J3KR12 359 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 CDC123O75794 336 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 GLSO94925 669 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 NPIPA8P0DM63 369 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 SMPD1P17405 629 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 GJA5P36382 358 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 GRB2P62993 217 aaKnown RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 HNF4GQ14541 408 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 IHHQ14623 411 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 TXNDC8Q6A555 127 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 LEG1Q6P5S2 330 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 LBX2Q6XYB7 198 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 CLRN3Q8NCR9 226 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 TMEM175Q9BSA9 504 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 PLSCR5A0PG75 271 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF891A8MT65 544 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 MSTNO14793 375 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 ARPC1BO15143 372 aaKnown RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF92Q03936 586 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 PRKCZQ05513 592 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 LTB4RQ15722 352 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 C18orf21Q32NC0 220 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-209ENST00000475639 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 RTL6Q6ICC9 239 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 BMPERQ8N8U9 685 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 YIPF5Q969M3 257 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 CLDND1Q9NY35 253 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 NEU3Q9UQ49 428 aa10.74□□□□□ -0.69
U2AF1-209ENST00000475639 CLEC3BP05452 202 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 BCKDHBP21953 392 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ACVRL1P37023 503 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PPT1P50897 306 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 RAB28P51157 221 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 RAP2BP61225 183 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 FAM189BP81408 668 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CLEC20AQ6ZU45 233 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CBLL1Q75N03 491 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF546Q86UE3 836 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 UEVLDQ8IX04 471 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CXorf58Q96LI9 332 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 KATNB1Q9BVA0 655 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ST6GALNAC5Q9BVH7 336 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 SLC38A1Q9H2H9 487 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF160Q9HCG1 818 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PTTG3PQ9NZH4 202 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 SUSD2Q9UGT4 822 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 NYNRINQ9P2P1 1898 aaKnown RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 GBF1Q92538 1859 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PPP1R2P9O14990 202 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 TGM5O43548 720 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 RNGTTO60942 597 aaKnown RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 TK1P04183 234 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 EIF4EP06730 217 aaKnown RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 SLC6A1P30531 599 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 RPS18P62269 152 aaKnown RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 BTG1P62324 171 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 GPM6BQ13491 265 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PGAP1Q75T13 922 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 KANSL1Q7Z3B3 1105 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 TSEN54Q7Z6J9 526 aaKnown RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PLPP5Q8NEB5 264 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 NANPQ8TBE9 248 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 SMIM3Q9BZL3 60 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 EXO1Q9UQ84 846 aaKnown RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PUS1Q9Y606 427 aaKnown RBP eCLIP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ANKRD36A6QL64 1941 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PLXNA1Q9UIW2 1896 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 P2RX6O15547 441 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 HPGDSO60760 199 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 FBXO24O75426 580 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 TRHRP34981 398 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 GPR4P46093 362 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 WNT4P56705 351 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 UBE2G2P60604 165 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 MEF2AQ02078 507 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 TLE4Q04727 773 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ADGRF3Q8IZF5 1079 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 SLC30A7Q8NEW0 376 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ADAMTS14Q8WXS8 1223 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 DNAJA3Q96EY1 480 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CHRDQ9H2X0 955 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 FAM212BQ9NTI7 297 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 COA4Q9NYJ1 87 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 KLHL42Q9P2K6 505 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 SLC22A7Q9Y694 548 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ENPP4Q9Y6X5 453 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 A0A0D9SG52 128 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 A8MXK9 166 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 LINC00587B1AMM8 73 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 KRBOX1C9JBD0 128 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 SGK494L7N484 410 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms