RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 EPS8Q12929 822 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 BNIP2Q12982 314 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 CHI3L2Q15782 390 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 MRPL2Q5T653 305 aaKnown RBP12.16□□□□□ -0.46
CCDC78-209ENST00000474647 C1QTNF12Q5T7M4 302 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 TMEM225Q6GV28 225 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 RINLQ6ZS11 566 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 RNF130Q86XS8 419 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 CMIPQ8IY22 773 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 CADM2Q8N3J6 435 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 ZIC4Q8N9L1 334 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 NEURL3Q96EH8 262 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 SF3B5Q9BWJ5 86 aaKnown RBP12.16□□□□□ -0.46
CCDC78-209ENST00000474647 TAPBPLQ9BX59 468 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 PLK3Q9H4B4 646 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 SEC61A2Q9H9S3 476 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 TMEFF2Q9UIK5 374 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-209ENST00000474647 SH3PXD2BA1X283 911 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 CFAP73A6NFT4 308 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 AGAP5A6NIR3 686 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 LIPT2A6NK58 231 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 hCG_2039718K7EN88 272 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 CHRM4P08173 479 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 GKN3PP0CG01 181 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 CCNIQ14094 377 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 GNA13Q14344 377 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 EFNB3Q15768 340 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 SPANXN4Q5MJ08 99 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 PRAMEF8Q5VWM4 474 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 PRAMEF7Q5VXH5 474 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 NIPAL3Q6P499 406 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 ZCCHC24Q8N2G6 241 aaKnown RBP12.15□□□□□ -0.46
CCDC78-209ENST00000474647 SVOPLQ8N434 492 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 PNPT1Q8TCS8 783 aaKnown RBP12.15□□□□□ -0.46
CCDC78-209ENST00000474647 DYDC1Q8WWB3 177 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 SLC38A1Q9H2H9 487 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 AKTIPQ9H8T0 292 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 DYNLRB1Q9NP97 96 aa12.15□□□□□ -0.46
CCDC78-209ENST00000474647 CELA3BP08861 270 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 MAP2K6P52564 334 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 RUNX1T1Q06455 604 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 TRIP10Q15642 601 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 SMU1Q2TAY7 513 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 FAM174BQ3ZCQ3 159 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 ANKRD16Q6P6B7 361 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 C12orf54Q6X4T0 127 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
CCDC78-209ENST00000474647 MEX3DQ86XN8 651 aaKnown RBP12.14□□□□□ -0.47
CCDC78-209ENST00000474647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
CCDC78-209ENST00000474647 ZNF781Q8N8C0 355 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 LINC01356Q8N9X3 169 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 OR4F15Q8NGB8 312 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 CKAP2Q8WWK9 683 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 TRNT1Q96Q11 434 aaKnown RBP12.14□□□□□ -0.47
CCDC78-209ENST00000474647 ADAM19Q9H013 955 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
CCDC78-209ENST00000474647 ARPC4-TTLL3A0A0A6YYG9 625 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 E9PBE3 544 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 FAAHO00519 579 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 FRS3O43559 492 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 ITM2AO43736 263 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 LILRA1O75019 489 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 SNNO75324 88 aaPredicted RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 UPK3AO75631 287 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 DBIP07108 87 aaKnown RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 NR2F1P10589 423 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 IFNGR1P15260 489 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 NPR2P20594 1047 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 RPS4Y1P22090 263 aaKnown RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 GIFP27352 417 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 S100A3P33764 101 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 THBS4P35443 961 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 ANXA11P50995 505 aaKnown RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 CLNS1AP54105 237 aaKnown RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 NME5P56597 212 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 ABCE1P61221 599 aaKnown RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 BST1Q10588 318 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 NPRL3Q12980 569 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 STX3Q13277 289 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 ADRM1Q16186 407 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 DPY19L1Q2PZI1 675 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 AP1ARQ63HQ0 302 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 CREB3L2Q70SY1 520 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 PEX5LQ8IYB4 626 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 TRIML2Q8N7C3 387 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 BCL2L2Q92843 193 aaPredicted RBP12.13□□□□□ -0.47
CCDC78-209ENST00000474647 HPS1Q92902 700 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 TESCQ96BS2 214 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 MAGEB18Q96M61 343 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 PANX1Q96RD7 426 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 NELFAQ9H3P2 528 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 TPK1Q9H3S4 243 aa12.13□□□□□ -0.47
CCDC78-209ENST00000474647 RLIMQ9NVW2 624 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms