RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 HIF3AQ9Y2N7 669 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 HRH3Q9Y5N1 445 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 MPDZO75970 2070 aa9.26□□□□□ -0.93
PRPF38A-202ENST00000474048 TNRC6AQ8NDV7 1962 aaKnown RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 A0A1W2PNR3 127 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 LIPT2A6NK58 231 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 LRRN3E7EW58 273 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 TNFSF11O14788 317 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 KLF4O43474 513 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 DNPH1O43598 174 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 IDH3BO43837 385 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 ZIC3O60481 467 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 GLSO94925 669 aaPredicted RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 PPP1R3DO95685 299 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 CLIC3O95833 236 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 ASAH2BP0C7U1 165 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 SFTPCP11686 197 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 POLR2IP36954 125 aaKnown RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 GIPRP48546 466 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 PCYT1AP49585 367 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 DIO1P49895 249 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 DAP3P51398 398 aaKnown RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 CHN2P52757 468 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 CARD18P57730 90 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 CTXN1P60606 82 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 RPL18Q07020 188 aaKnown RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 MEDAGQ5VYS4 303 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 TMEM236Q5W0B7 351 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 GPR139Q6DWJ6 353 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 TMPPEQ6ZT21 453 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 GPAT4Q86UL3 456 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 KIF18BQ86Y91 864 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 CHERPQ8IWX8 916 aaKnown RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 UEVLDQ8IX04 471 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 MCEMP1Q8IX19 187 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 LRRC17Q8N6Y2 441 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 TEX19Q8NA77 164 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 OR8J1Q8NGP2 316 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 OR2V1Q8NHB1 315 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 NEIL3Q8TAT5 605 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 LIPHQ8WWY8 451 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 RFKQ969G6 155 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 CPNE4Q96A23 557 aaPredicted RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 ARL5BQ96KC2 179 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 MOGAT1Q96PD6 335 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 GPA33Q99795 319 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 SLC6A15Q9H2J7 730 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 MCCC2Q9HCC0 563 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 ACKR4Q9NPB9 350 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 MCTS1Q9ULC4 181 aaKnown RBP9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 MYRFQ9Y2G1 1151 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 TPRKBQ9Y3C4 175 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 CSAG2Q9Y5P2 127 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 ACACAQ13085 2346 aa9.25□□□□□ -0.93
PRPF38A-202ENST00000474048 PCNX3Q9H6A9 2034 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 URB1O60287 2271 aaKnown RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 PRR23D1E9PI22 279 aaPredicted RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 NPIPA2E9PIF3 369 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 NPIPA3F8WFD2 350 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 DLGAP1O14490 977 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 FAM20BO75063 409 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 NPIPB7O75200 414 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 AKR7A3O95154 331 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 VAMP5O95183 116 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 RENP00797 406 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 F13BP05160 661 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 CD14P08571 375 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 RPSAP08865 295 aaKnown RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 GNAO1P09471 354 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 PRR23D2P0DMB1 279 aaPredicted RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 NR2C1P13056 603 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF43P17038 809 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 IL11P20809 199 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 ENPP1P22413 925 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 ACVR2AP27037 513 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 AQP2P41181 271 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 SLC16A1P53985 500 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 RPS7P62081 194 aaKnown RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 RPS4XP62701 263 aaKnown RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 CSNK2BP67870 215 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 CDK5Q00535 292 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 PMP22Q01453 160 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 SRYQ05066 204 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 LGALS3BPQ08380 585 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 SF3B4Q15427 424 aaKnown RBP eCLIP9.24□□□□□ -0.932e-6■■■■■ 29.3
PRPF38A-202ENST00000474048 GXYLT1Q4G148 440 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 RBM48Q5RL73 367 aaKnown RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 SLC35F1Q5T1Q4 408 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 FAM205BPQ63HN1 556 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 C12orf73Q69YU5 71 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 Q6ZPB1 254 aaPredicted RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 Q6ZS92 163 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 IGFN1Q86VF2 1251 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 GID4Q8IVV7 300 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 PM20D2Q8IYS1 436 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 TCEANCQ8N8B7 351 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 ADPRHL1Q8NDY3 354 aa9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 SNRNP27Q8WVK2 155 aaKnown RBP9.24□□□□□ -0.93
PRPF38A-202ENST00000474048 MIB2Q96AX9 1013 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms