RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 KDELR2P33947 212 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 CYBRD1Q53TN4 286 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 TTC33Q6PID6 262 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-203ENST00000474047 HACD2Q6Y1H2 254 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 DEF8Q6ZN54 512 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 C22orf34Q6ZV56 151 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 CARM1Q86X55 608 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 RBM45Q8IUH3 476 aaKnown RBP12.57□□□□□ -0.4
VAMP4-203ENST00000474047 ADAMTS16Q8TE57 1224 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 LRRC37BQ96QE4 947 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 ASPNQ9BXN1 380 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 FBN2P35556 2912 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 CHP2O43745 196 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 GMNNO75496 209 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 THBDP07204 575 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 ZNF43P17038 809 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 GGT1P19440 569 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 IGHV1-2P23083 117 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 EDNRAP25101 427 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 GRPRP30550 384 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 TAS2R41P59536 307 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 PSME3P61289 254 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 NPTX1Q15818 432 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 BEX5Q5H9J7 111 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 KDM8Q8N371 416 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 OR4D11Q8NGI4 311 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 KCTD14Q9BQ13 255 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-203ENST00000474047 TMEM43Q9BTV4 400 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 PTDSS2Q9BVG9 487 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 LIME1Q9H400 295 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 ALG2Q9H553 416 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 ADA2Q9NZK5 511 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 SLC7A7Q9UM01 511 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 B3GALT5Q9Y2C3 310 aa12.57□□□□□ -0.4
VAMP4-203ENST00000474047 IGKV1D-42A0A075B6H8 117 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 DEFB108AA8MXU0 73 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 FTCDNL1E5RQL4 147 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 M0R082 166 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 RAD51DO75771 328 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 IFNA8P32881 189 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 NTF4P34130 210 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 NR1H2P55055 460 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 FOXD4Q12950 439 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-203ENST00000474047 KEAP1Q14145 624 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 CREB3L2Q70SY1 520 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 H1FNTQ75WM6 255 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-203ENST00000474047 ABHD12BQ7Z5M8 362 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-203ENST00000474047 PIGWQ7Z7B1 504 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 ZNF433Q8N7K0 673 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-203ENST00000474047 POMGNT2Q8NAT1 580 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 ZNF417Q8TAU3 575 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 TMEM45BQ96B21 275 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 OXGR1Q96P68 337 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 ZNF385AQ96PM9 386 aaKnown RBP12.56□□□□□ -0.4
VAMP4-203ENST00000474047 ZNF587Q96SQ5 575 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-203ENST00000474047 PLEKHA6Q9Y2H5 1048 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 CORINQ9Y5Q5 1042 aa12.56□□□□□ -0.4
VAMP4-203ENST00000474047 ABCA4P78363 2273 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 LRBAP50851 2863 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 ANKRD17O75179 2603 aaKnown RBP12.55□□□□□ -0.4
VAMP4-203ENST00000474047 CXCR6O00574 342 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 NME4O00746 187 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 SHOX2O60902 331 aaPredicted RBP12.55□□□□□ -0.4
VAMP4-203ENST00000474047 OR6A2O95222 327 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 ZNF682O95780 498 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 TNFRSF1BP20333 461 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 OR1E2P47887 323 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 CRYBA2P53672 197 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 CLDN17P56750 224 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 SELENOWP63302 87 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 MXRA7P84157 204 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 PMS2P3Q13401 168 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 TAB1Q15750 504 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 C9orf135Q5VTT2 229 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 NIPAL3Q6P499 406 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 OR6S1Q8NH40 331 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 FAM162AQ96A26 154 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 PLPPR2Q96GM1 343 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 MPP4Q96JB8 637 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 CCT8L2Q96SF2 557 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 SLCO5A1Q9H2Y9 848 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 SPAG4Q9NPE6 437 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 SLC7A10Q9NS82 523 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 TAS2R16Q9NYV7 291 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 POLQO75417 2590 aa12.55□□□□□ -0.4
VAMP4-203ENST00000474047 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 AKAP8O43823 692 aaKnown RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 RAF1P04049 648 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 HIST1H2ABP04908 130 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 HOXC12P31275 282 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 GSK3BP49841 420 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 P2RY4P51582 365 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 PPA1Q15181 289 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 TSPO2Q5TGU0 170 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 GKAP1Q5VSY0 366 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 OR7E24Q6IFN5 339 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms