RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ADAD1Q96M93 576 aaKnown RBP13.39□□□□□ -0.27
VTI1A-203ENST00000472892 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
VTI1A-203ENST00000472892 SLC52A3Q9NQ40 469 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 TCF7L2Q9NQB0 619 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 ADPRHL2Q9NX46 363 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 SLC25A37Q9NYZ2 338 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 SLAMF8Q9P0V8 285 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 GMEB1Q9Y692 573 aa13.39□□□□□ -0.27
VTI1A-203ENST00000472892 FTCDNL1E5RQL4 147 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 CRLF1O75462 422 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 ETS2P15036 469 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 FABP6P51161 128 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 EGR4Q05215 589 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 MSRB3Q8IXL7 192 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 GOLGA6L1Q8N7Z2 621 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 OR10H5Q8NGA6 315 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 CCDC28BQ9BUN5 200 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 PTDSS2Q9BVG9 487 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 CACNG6Q9BXT2 260 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 FKRPQ9H9S5 495 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 TMEM45AQ9NWC5 275 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 RASD1Q9Y272 281 aa13.38□□□□□ -0.27
VTI1A-203ENST00000472892 OR6C65A6NJZ3 312 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 KIAA1324LA8MWY0 1029 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-203ENST00000472892 POLR3GO15318 223 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-203ENST00000472892 SSX4O60224 188 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 FZD7O75084 574 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 WNT11O96014 354 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 PRKAR1BP31321 381 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 SELENOPP49908 381 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 STX1BP61266 288 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 HOXC5Q00444 222 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 DMTNQ08495 405 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 C6orf89Q6UWU4 347 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 ABHD12BQ7Z5M8 362 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-203ENST00000472892 LSMEM1Q8N8F7 131 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 KCNK17Q96T54 332 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 EBF4Q9BQW3 602 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 C12orf10Q9HB07 376 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 SLCO1B3Q9NPD5 702 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 OBP2BQ9NPH6 170 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 ADAM21Q9UKJ8 722 aa13.37□□□□□ -0.27
VTI1A-203ENST00000472892 C5orf58C9J3I9 102 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 H7C417 338 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 KRT33AO76009 404 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 AHSA1O95433 338 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 ARAFP10398 606 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 CDH2P19022 906 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-203ENST00000472892 PAX7P23759 505 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 APOBEC3AP31941 199 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-203ENST00000472892 DSCR9P59020 149 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 RAB35Q15286 201 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 HIKESHIQ53FT3 197 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 PAGE3Q5JUK9 113 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 C10orf111Q8N326 155 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 LRRC8CQ8TDW0 803 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 SLC25A36Q96CQ1 311 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 SPDL1Q96EA4 605 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-203ENST00000472892 RHNO1Q9BSD3 238 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 LINC00470Q9BZP3 86 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 CCDC167Q9P0B6 97 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 ATP23Q9Y6H3 246 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 PLCE1Q9P212 2302 aa13.36□□□□□ -0.27
VTI1A-203ENST00000472892 ANK3Q12955 4377 aaKnown RBP13.36□□□□□ -0.27
VTI1A-203ENST00000472892 IGHV4-30-2A0A087WSY4 118 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 TRBV5-3A0A0A0MS03 114 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ELOA3DA6NLF2 546 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ZNF587BE7ETH6 402 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 TLX2O43763 284 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-203ENST00000472892 CD5LO43866 347 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 UPK3AO75631 287 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ZNF432O94892 652 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 LGI1O95970 557 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 PNMTP11086 282 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 GPX2P18283 190 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 PPIBP23284 216 aaKnown RBP13.35□□□□□ -0.27
VTI1A-203ENST00000472892 RPS5P46782 204 aaKnown RBP13.35□□□□□ -0.27
VTI1A-203ENST00000472892 NUDT6P53370 316 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 AQP5P55064 265 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 CDK6Q00534 326 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 LGALS3BPQ08380 585 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ELOA3BQ3SY89 546 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 TBRG1Q3YBR2 411 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 GCNT6Q5T4J0 391 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 REEP3Q6NUK4 255 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 NIPAL3Q6P499 406 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 DHRS4L2Q6PKH6 230 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 KLHL24Q6TFL4 600 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 LINGO2Q7L985 606 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 COMTD1Q86VU5 262 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 KDM8Q8N371 416 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ELOA3Q8NG57 546 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 NFKBIDQ8NI38 313 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 MAGEE2Q8TD90 523 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-203ENST00000472892 BCL2L2Q92843 193 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ATP6V1G3Q96LB4 118 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-203ENST00000472892 VAPAQ9P0L0 249 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms