RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 COL8A2P25067 703 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 SOAT1P35610 550 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 CCT5P48643 541 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 TGFBR3Q03167 851 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 BNIP2Q12982 314 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 CEACAM7Q14002 265 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 SYPL1Q16563 259 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 PGS1Q32NB8 556 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 OTUD3Q5T2D3 398 aaPredicted RBP8.04□□□□□ -1.12
VCL-204ENST00000472585 TNFAIP8L2Q6P589 184 aaPredicted RBP8.04□□□□□ -1.12
VCL-204ENST00000472585 PAQR6Q6TCH4 344 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 ANKRD46Q86W74 232 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 ANKFN1Q8N957 763 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 CCDC63Q8NA47 563 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 TMEM186Q96B77 213 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 MOAP1Q96BY2 351 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 ROPN1LQ96C74 230 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 ZHX1-C8orf76Q96EF9 292 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 SLC35G5Q96KT7 338 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 PPP3R2Q96LZ3 170 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 KATNB1Q9BVA0 655 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 SUCNR1Q9BXA5 334 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 RACGAP1Q9H0H5 632 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 EXOSC3Q9NQT5 275 aaKnown RBP8.04□□□□□ -1.12
VCL-204ENST00000472585 TMEM45AQ9NWC5 275 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 HIF1ANQ9NWT6 349 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 SLC35A3Q9Y2D2 325 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 WDR45Q9Y484 360 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 SPIN1Q9Y657 262 aaPredicted RBP8.04□□□□□ -1.12
VCL-204ENST00000472585 WNK2Q9Y3S1 2297 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 ARPC4-TTLL3A0A0A6YYG9 625 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 RNF103-CHMP3A0A140T963 221 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 AQP7P3A6NL99 342 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 hCG_2039718K7EN88 272 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 COPEO14579 308 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 NPHS1O60500 1241 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 EIF1BO60739 113 aaKnown RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 PDE5AO76074 875 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 BCL10O95999 233 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 CHEK2O96017 543 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 AK1P00568 194 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 IGKV3-15P01624 115 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 CRYAAP02489 173 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 CHRM4P08173 479 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ADRA2AP08913 450 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 FKBP2P26885 142 aaKnown RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 RPL3P39023 403 aaKnown RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 ACAA2P42765 397 aaKnown RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 SLC1A3P43003 542 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ARFIP2P53365 341 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 CLDN8P56748 225 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 EPS8Q12929 822 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 OR7A5Q15622 319 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ADRM1Q16186 407 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ELFN2Q5R3F8 820 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 SAXO2Q658L1 398 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 FAHD2BQ6P2I3 314 aaPredicted RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 KLHL24Q6TFL4 600 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 CREB3L2Q70SY1 520 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 C16orf62Q7Z3J2 963 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 SPATA21Q7Z572 469 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 WDFY1Q8IWB7 410 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 KDM8Q8N371 416 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ARFGAP2Q8N6H7 521 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 POMGNT2Q8NAT1 580 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 FNDC5Q8NAU1 212 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 NUP37Q8NFH4 326 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 UBASH3BQ8TF42 649 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 WDR60Q8WVS4 1066 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 NEU4Q8WWR8 484 aaPredicted RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 FAHD2AQ96GK7 314 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ALKBH3Q96Q83 286 aaPredicted RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 NAA11Q9BSU3 229 aaPredicted RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 SF3B5Q9BWJ5 86 aaKnown RBP8.03□□□□□ -1.12
VCL-204ENST00000472585 SLC38A1Q9H2H9 487 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 LPAR2Q9HBW0 351 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ATAD3AQ9NVI7 634 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 RLIMQ9NVW2 624 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 ARMCX1Q9P291 453 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 SLC17A7Q9P2U7 560 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 PCDHGB4Q9UN71 923 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 CHST2Q9Y4C5 530 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 SPEF1Q9Y4P9 236 aa8.03□□□□□ -1.12
VCL-204ENST00000472585 IGHV2OR16-5A0A0B4J2B6 119 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 AGAP5A6NIR3 686 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 SMIM23A6NLE4 172 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 VSTM5A8MXK1 200 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 NPIPB7O75200 414 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 ZNF432O94892 652 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 CPSF4O95639 269 aaKnown RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 HPXP02790 462 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 GKN3PP0CG01 181 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 PRG2P13727 222 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 CBR1P16152 277 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 NPR2P20594 1047 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 RPS4Y1P22090 263 aaKnown RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 MAPK1P28482 360 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 POLR2HP52434 150 aaKnown RBP8.02□□□□□ -1.13
VCL-204ENST00000472585 SEC24CP53992 1094 aa8.02□□□□□ -1.13
VCL-204ENST00000472585 LMO4P61968 165 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms