RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TRAV36DV7A0A075B6V5 113 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 CCT8L1PA6NM43 557 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 PDLIM1O00151 329 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 DYNC1I1O14576 645 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 AIM2O14862 343 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 LYZL6O75951 148 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 TAB1Q15750 504 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 ENTPD8Q5MY95 495 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 CASP12Q6UXS9 341 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 HACD2Q6Y1H2 254 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 CREB3L2Q70SY1 520 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 ARPINQ7Z6K5 226 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 GPAT4Q86UL3 456 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 WFDC8Q8IUA0 241 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 SLC15A3Q8IY34 581 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 MICU2Q8IYU8 434 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 UBE2J2Q8N2K1 259 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 OR2T12Q8NG77 320 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 MBD6Q96DN6 1003 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
TOP3B-215ENST00000470338 HS3ST6Q96QI5 342 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 HOPXQ9BPY8 73 aaPredicted RBP12.48□□□□□ -0.41
TOP3B-215ENST00000470338 TMEM43Q9BTV4 400 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 FAM107BQ9H098 131 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 CCM2LQ9NUG4 571 aaPredicted RBP12.48□□□□□ -0.41
TOP3B-215ENST00000470338 ASB6Q9NWX5 421 aa12.48□□□□□ -0.41
TOP3B-215ENST00000470338 HEATR1Q9H583 2144 aaKnown RBP12.47□□□□□ -0.41
TOP3B-215ENST00000470338 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 ITPR3Q14573 2671 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-215ENST00000470338 ELOVL7A1L3X0 281 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 CHP2O43745 196 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 ATE1O95260 518 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 LYPD3O95274 346 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 IFNA14P01570 189 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 RAF1P04049 648 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 THY1P04216 161 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 DNASE1P24855 282 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 KDELR2P33947 212 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 NR1H2P55055 460 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 GNGT1P63211 74 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 MFSD13AQ14CX5 517 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 TIMM23BQ5SRD1 257 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 TSPO2Q5TGU0 170 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 SEZ6L2Q6UXD5 910 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 SPNS3Q6ZMD2 512 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 AAED1Q7RTV5 226 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 PIGWQ7Z7B1 504 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 TSPYL5Q86VY4 417 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-215ENST00000470338 P2RY8Q86VZ1 359 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 EPHX4Q8IUS5 362 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 P3H2Q8IVL5 708 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 VANGL1Q8TAA9 524 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-215ENST00000470338 RNF217Q8TC41 542 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 CMTM5Q96DZ9 223 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 SLC41A3Q96GZ6 507 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 EPYCQ99645 322 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 CXXC4Q9H2H0 198 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 BAG5Q9UL15 447 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 B3GALT5Q9Y2C3 310 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 PLEKHA6Q9Y2H5 1048 aa12.47□□□□□ -0.41
TOP3B-215ENST00000470338 MED13LQ71F56 2210 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 LOC102725191A0A1B0GVB3 256 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 TRAPPC13A5PLN9 417 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 CPSF4LA6NMK7 179 aaKnown RBP12.46□□□□□ -0.41
TOP3B-215ENST00000470338 M0R082 166 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 NME4O00746 187 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 BGLAPP02818 100 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 ITGA5P08648 1049 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 GGT1P19440 569 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 PRDX6P30041 224 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 GRPRP30550 384 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 ART1P52961 327 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 FOXG1P55316 489 aaPredicted RBP12.46□□□□□ -0.41
TOP3B-215ENST00000470338 LTBQ06643 244 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 FAPQ12884 760 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 H1FNTQ75WM6 255 aaPredicted RBP12.46□□□□□ -0.41
TOP3B-215ENST00000470338 SSX8Q7RTT4 187 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 ADPRHL1Q8NDY3 354 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 ZNF417Q8TAU3 575 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 ADAMTS16Q8TE57 1224 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 PROX1Q92786 737 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 PLPPR2Q96GM1 343 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 MUS81Q96NY9 551 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 OXGR1Q96P68 337 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 ZNF587Q96SQ5 575 aaPredicted RBP12.46□□□□□ -0.41
TOP3B-215ENST00000470338 FOXC2Q99958 501 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 AMBRA1Q9C0C7 1298 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 NGBQ9NPG2 151 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 TAS2R16Q9NYV7 291 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 B3GAT1Q9P2W7 334 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 UPB1Q9UBR1 384 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 SEC14L4Q9UDX3 406 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.41
TOP3B-215ENST00000470338 OR5H1A6NKK0 313 aa12.45□□□□□ -0.42
TOP3B-215ENST00000470338 MS4A18H0YCH9 400 aa12.45□□□□□ -0.42
TOP3B-215ENST00000470338 CD53P19397 219 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms