RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TMEM81Q6P7N7 255 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 C5orf46Q6UWT4 87 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 PROKR2Q8NFJ6 384 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 PAQR8Q8TEZ7 354 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 KISS1RQ969F8 398 aaPredicted RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 Q96M85 177 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 GPN2Q9H9Y4 310 aaPredicted RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 EXOGQ9Y2C4 368 aaKnown RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 CCDC182A6NF36 153 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 SLC22A31A6NKX4 558 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 M0R3G1 203 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 RBMS1P29558 406 aaKnown RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 DLX5P56178 289 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 LSM3P62310 102 aaKnown RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 C1DQ13901 141 aaKnown RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 SLC6A19Q695T7 634 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 H3F3CQ6NXT2 135 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 FADS6Q8N9I5 356 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 LSM14AQ8ND56 463 aaKnown RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 THOC3Q96J01 351 aaKnown RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 MRGPRX4Q96LA9 322 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 FRMD6Q96NE9 622 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 NMNAT3Q96T66 252 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 ANGPTL4Q9BY76 406 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 NDEL1Q9GZM8 345 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 PTGES2Q9H7Z7 377 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 SH2D2AQ9NP31 389 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 TNFRSF10DQ9UBN6 386 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 SLC6A5Q9Y345 797 aa16.4■□□□□ 0.22
SMC4-211ENST00000469858 EXOSC1Q9Y3B2 195 aaKnown RBP16.4■□□□□ 0.22
SMC4-211ENST00000469858 FAM47E-STBD1D6RA91 191 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 C11orf98E9PRG8 122 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 ETV2O00321 342 aaPredicted RBP16.39■□□□□ 0.21
SMC4-211ENST00000469858 IDH3BO43837 385 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 TSPAN19P0C672 248 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 CSRP1P21291 193 aaKnown RBP16.39■□□□□ 0.21
SMC4-211ENST00000469858 SLC2A5P22732 501 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 GRPRP30550 384 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 LIMK1P53667 647 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 AQP6Q13520 282 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 TSTQ16762 297 aaKnown RBP16.39■□□□□ 0.21
SMC4-211ENST00000469858 ACER2Q5QJU3 275 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 FAM122BQ7Z309 247 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 MDGA2Q7Z553 956 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 PLCZ1Q86YW0 608 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 OR5J2Q8NH18 312 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 ADAMTS17Q8TE56 1095 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 RPL3LQ92901 407 aaKnown RBP16.39■□□□□ 0.21
SMC4-211ENST00000469858 C1GALT1C1Q96EU7 318 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 ARL5BQ96KC2 179 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 TEAD3Q99594 435 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 FAM117AQ9C073 453 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 DMXL1Q9Y485 3027 aa16.39■□□□□ 0.21
SMC4-211ENST00000469858 H3BML4 177 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 IMPA2O14732 288 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 OR2T1O43869 369 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 IL11P20809 199 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 RGS6P49758 472 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 NFATC3Q12968 1075 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 SLC25A53Q5H9E4 307 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 OR2G6Q5TZ20 316 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 LHFPL3Q86UP9 236 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 NPEPL1Q8NDH3 523 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 OR5M1Q8NGP8 315 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 POC1BQ8TC44 478 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 ZPLD1Q8TCW7 415 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 DDIT4LQ96D03 193 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 MYCBPQ99417 103 aaPredicted RBP16.38■□□□□ 0.21
SMC4-211ENST00000469858 PROK2Q9HC23 129 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 TAS2R5Q9NYW4 299 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 TRIM64BA6NI03 449 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 LIMS3P0CW19 117 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 LIMS4P0CW20 117 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 TFPIP10646 304 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 SDHAP31040 664 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 NOVA1P51513 510 aaKnown RBP16.38■□□□□ 0.21
SMC4-211ENST00000469858 LSAMPQ13449 338 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 SPCS2Q15005 226 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 TGIF1Q15583 401 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 SGCBQ16585 318 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 ARMC4Q5T2S8 1044 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 PSD4Q8NDX1 1056 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 PSMF1Q92530 271 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 SGCZQ96LD1 299 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 JSRP1Q96MG2 331 aaPredicted RBP16.38■□□□□ 0.21
SMC4-211ENST00000469858 OPALINQ96PE5 141 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 ASPNQ9BXN1 380 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 GRHPRQ9UBQ7 328 aa16.38■□□□□ 0.21
SMC4-211ENST00000469858 OR6C68A6NDL8 312 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 CDRT15L2A8MXV6 281 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 ZNF208O43345 1280 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 EFNA2O43921 213 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 IGHA1P01876 353 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 MRPL3P09001 348 aaKnown RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 APEHP13798 732 aaKnown RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 AHCYP23526 432 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 GADD45AP24522 165 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 CD82P27701 267 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 WNT4P56705 351 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms