RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 C1QTNF6Q9BXI9 259 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ACTR3CQ9C0K3 210 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 COA1Q9GZY4 146 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PRDM13Q9H4Q3 707 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 IKZF5Q9H5V7 419 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CWH43Q9H720 699 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CNTD2Q9H8S5 307 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SFXN1Q9H9B4 322 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RDH14Q9HBH5 336 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 HRASLSQ9HDD0 168 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TREM1Q9NP99 234 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PARD6AQ9NPB6 346 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SLAMF7Q9NQ25 335 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TRIM36Q9NQ86 728 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TLR8Q9NR97 1041 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ACER3Q9NUN7 267 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OSER1Q9NX31 292 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 MARCH5Q9NX47 278 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NLGN3Q9NZ94 848 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NTMQ9P121 344 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CGGBP1Q9UFW8 167 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PISDQ9UG56 409 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 EIF2B4Q9UI10 523 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SH3BGRL2Q9UJC5 107 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SLC25A13Q9UJS0 675 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TUBD1Q9UJT1 453 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 FBXW11Q9UKB1 542 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 UTS2RQ9UKP6 389 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 EXOGQ9Y2C4 368 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SNX10Q9Y5X0 201 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 FLVCR1Q9Y5Y0 555 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ANKRD36A6QL64 1941 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 A0A1W2PPH5 198 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ANKRD20A5PA0PJZ0 165 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CDHR4A6H8M9 788 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3BA6NDS4 549 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PGPEP1LA6NFU8 196 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 URADA6NGE7 173 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR2AT4A6NND4 320 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 A8MXE2 369 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 F8VVB4 439 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 F8VWA3 439 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 H0YIV9 168 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR7A17O14581 309 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF197O14709 1029 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NPC1O15118 1278 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SURF4O15260 269 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 EMC8O43402 210 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 KDELR3O43731 214 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TSPAN3O60637 253 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 MSCO60682 206 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ICOSLGO75144 302 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFS3O75489 264 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CLEC3AO75596 197 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CBR3O75828 277 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SPDEFO95238 335 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 GUCA1CO95843 209 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 MOCS2O96007 188 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 QDPRP09417 244 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 MYF5P13349 255 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 INSRRP14616 1297 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SDC1P18827 310 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CR2P20023 1033 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 MAOAP21397 527 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 MPZP25189 248 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 BDKRB2P30411 391 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 VIPR1P32241 457 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PNPLA4P41247 253 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFV1P49821 464 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 GATMP50440 423 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CEBPGP53567 150 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 F2RL1P55085 397 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CDH11P55287 796 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CDH12P55289 794 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PCBP3P57721 371 aaKnown RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ERVPABLB-1P60509 514 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 EFNB1P98172 346 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 BCL2L1Q07817 233 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 AIMP2Q13155 320 aaKnown RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CRHR2Q13324 411 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SLC10A1Q14973 349 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 RSU1Q15404 277 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NKAIN1Q4KMZ8 207 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NBPF12Q5TAG4 269 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3GQ6DHY5 549 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR52W1Q6IF63 320 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF770Q6IQ21 691 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 C11orf87Q6NUJ2 197 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 JMJD6Q6NYC1 403 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 BTNL3Q6UXE8 466 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 LINGO2Q7L985 606 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SLC16A14Q7RTX9 510 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 GOLGA7Q7Z5G4 137 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 RABEPKQ7Z6M1 372 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 VRK2Q86Y07 508 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TRAPPC5Q8IUR0 188 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 FBXO16Q8IX29 292 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 C9orf40Q8IXQ3 194 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ZFP82Q8N141 532 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms