RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 RIPPLY2Q5TAB7 128 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 KDELC1Q6UW63 502 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 ACER1Q8TDN7 264 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 SEC22AQ96IW7 307 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 LZTS2Q9BRK4 669 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 HDHD3Q9BSH5 251 aaPredicted RBP3.1□□□□□ -1.91
XRN1-207ENST00000468894 THUMPD2Q9BTF0 503 aaKnown RBP3.1□□□□□ -1.91
XRN1-207ENST00000468894 ROGDIQ9GZN7 287 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 NECAP2Q9NVZ3 263 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 HPF1Q9NWY4 346 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 TBX21Q9UL17 535 aa3.1□□□□□ -1.91
XRN1-207ENST00000468894 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 HIP1O00291 1037 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 SNX4O95219 450 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 KLHL30Q0D2K2 578 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 C1orf61Q13536 156 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 ATP6AP1Q15904 470 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 TATDN3Q17R31 274 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 PIGGQ5H8A4 983 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 OR52W1Q6IF63 320 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 ZNF621Q6ZSS3 439 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 RUFY3Q7L099 469 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 SLC26A11Q86WA9 606 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 SAXO1Q8IYX7 474 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 SLC38A6Q8IZM9 456 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 MNS1Q8NEH6 495 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 DUSP18Q8NEJ0 188 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 DEFB127Q9H1M4 99 aa3.09□□□□□ -1.91
XRN1-207ENST00000468894 LIN28AQ9H9Z2 209 aaKnown RBP3.09□□□□□ -1.91
XRN1-207ENST00000468894 DMAP1Q9NPF5 467 aaPredicted RBP3.09□□□□□ -1.91
XRN1-207ENST00000468894 STOX2Q9P2F5 926 aaPredicted RBP3.09□□□□□ -1.91
XRN1-207ENST00000468894 TMEM94Q12767 1356 aa3.09□□□□□ -1.92
XRN1-207ENST00000468894 ZCCHC6Q5VYS8 1495 aaKnown RBP3.09□□□□□ -1.92
XRN1-207ENST00000468894 C11orf94C9JXX5 98 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 PFKFB2O60825 505 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 OPN1MWP04001 364 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 OPN1MW2P0DN77 364 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 OPN1MW3P0DN78 364 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 HSPA5P11021 654 aaKnown RBP3.08□□□□□ -1.92
XRN1-207ENST00000468894 TDGF1P13385 188 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 LONP1P36776 959 aaKnown RBP3.08□□□□□ -1.92
XRN1-207ENST00000468894 TDGF1P3P51864 188 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 ARFIP1P53367 373 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 GBE1Q04446 702 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 PPP1R42Q7Z4L9 355 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 DRAXINQ8NBI3 349 aaPredicted RBP3.08□□□□□ -1.92
XRN1-207ENST00000468894 OR4D5Q8NGN0 318 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 CTNNBL1Q8WYA6 563 aaPredicted RBP3.08□□□□□ -1.92
XRN1-207ENST00000468894 CMTM7Q96FZ5 175 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 SLC39A3Q9BRY0 314 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 TUBGCP2Q9BSJ2 902 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 RNF167Q9H6Y7 350 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 QPCTLQ9NXS2 382 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 SLC25A37Q9NYZ2 338 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 CLCF1Q9UBD9 225 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 GNPTGQ9UJJ9 305 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 COPS3Q9UNS2 423 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 KIF3AQ9Y496 699 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 KDRP35968 1356 aa3.08□□□□□ -1.92
XRN1-207ENST00000468894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.08□□□□□ -1.92
XRN1-207ENST00000468894 NSG1A0A0A6YYJ2 146 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 A0A1B0GWJ7 208 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 LAD1O00515 517 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 UGT1A9O60656 530 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 N4BP1O75113 896 aaKnown RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 PLEKP08567 350 aaPredicted RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 NEFHP12036 1026 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 IMPDH1P20839 514 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 HNRNPA2B1P22626 353 aaKnown RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 HOXA9P31269 272 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 FMO3P31513 532 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 GLP1RP43220 463 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 RPS9P46781 194 aaKnown RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 RGS4P49798 205 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 PKNOX1P55347 436 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 SNTB2Q13425 540 aaKnown RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 CARD16Q5EG05 197 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 SAMD4BQ5PRF9 694 aaKnown RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 C10orf120Q5SQS8 335 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 BEND3Q5T5X7 828 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 ZNF620Q6ZNG0 422 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 C6orf120Q7Z4R8 191 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 PAQR7Q86WK9 346 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 SLC35F2Q8IXU6 374 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 SYT14Q8NB59 555 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 TCEANC2Q96MN5 208 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 TCHPQ9BT92 498 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 TPK1Q9H3S4 243 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 SRMSQ9H3Y6 488 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 RBKSQ9H477 322 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 SIAEQ9HAT2 523 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 RAB18Q9NP72 206 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 FARSBQ9NSD9 589 aaKnown RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 DEC1Q9P2X7 70 aa3.07□□□□□ -1.92
XRN1-207ENST00000468894 RPL36Q9Y3U8 105 aaKnown RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 V9GYY5 206 aaPredicted RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 CENPJQ9HC77 1338 aaPredicted RBP3.07□□□□□ -1.92
XRN1-207ENST00000468894 BRD4O60885 1362 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms