RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 GPR171O14626 319 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 SNX3O60493 162 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 TPST2O60704 377 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 MRPL33O75394 65 aaKnown RBP12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 AHSA1O95433 338 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 LY6G6DO95868 133 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 EDNRAP25101 427 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 RPS5P46782 204 aaKnown RBP12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 H3F3AP84243 136 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 ETFDHQ16134 617 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 ALG10BQ5I7T1 473 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 TMEM225Q6GV28 225 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 ABLIM2Q6H8Q1 611 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 ULK3Q6PHR2 472 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 PAQR6Q6TCH4 344 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 RANBP3LQ86VV4 465 aaPredicted RBP12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 TREML1Q86YW5 311 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 UBE2J2Q8N2K1 259 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 GPR32P1Q8NGA4 272 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 VANGL1Q8TAA9 524 aaPredicted RBP12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 TAMM41Q96BW9 452 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 SLC47A1Q96FL8 570 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 PERPQ96FX8 193 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 PLPPR2Q96GM1 343 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 MCHR1Q99705 422 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 EFCAB1Q9HAE3 211 aa12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 TESQ9UGI8 421 aaKnown RBP12.43□□□□□ -0.42
CCHCR1-211ENST00000467553 HIVEP2P31629 2446 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 ZANQ9Y493 2812 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 IGKV3D-15A0A087WSY6 115 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 TMEM229AB2RXF0 380 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 IGHV3-9P01782 118 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 C8BP07358 591 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 PNMTP11086 282 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 EGR4Q05215 589 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 ERICH5Q6P6B1 374 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 CCDC80Q76M96 950 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 GPAT4Q86UL3 456 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 RBM45Q8IUH3 476 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 GABRG1Q8N1C3 465 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 SLC38A4Q969I6 547 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 KTI12Q96EK9 354 aaPredicted RBP12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 ARHGDIGQ99819 225 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 ESRP2Q9H6T0 727 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 EVA1AQ9H8M9 152 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 C12orf10Q9HB07 376 aa12.42□□□□□ -0.42
CCHCR1-211ENST00000467553 CPSF4LA6NMK7 179 aaKnown RBP12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 NPIPB7O75200 414 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 CNOT4O95628 575 aaKnown RBP12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 CD247P20963 164 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 CBLP22681 906 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 IL32P24001 234 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 NTF4P34130 210 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 SLC16A1P53985 500 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 ITGADQ13349 1161 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 VEZF1Q14119 521 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 SLC17A1Q14916 467 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 NRF1Q16656 503 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 FAM91A1Q658Y4 838 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 Q6ZT83 130 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 OR2T12Q8NG77 320 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 OR4D11Q8NGI4 311 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 RASSF5Q8WWW0 418 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 KISS1RQ969F8 398 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 TAAR8Q969N4 342 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 APH1AQ96BI3 265 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 S100PBPQ96BU1 408 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 CMTM5Q96DZ9 223 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 TRMT61AQ96FX7 289 aaKnown RBP12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 HOPXQ9BPY8 73 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 MYLK2Q9H1R3 596 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 PARPBPQ9NWS1 579 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 CMTM6Q9NX76 183 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 FLVCR1Q9Y5Y0 555 aa12.41□□□□□ -0.42
CCHCR1-211ENST00000467553 TLN2Q9Y4G6 2542 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 A0A087WUJ7 227 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 A0A0B4J2E0 115 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 A0A1B0GX12 115 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 ELOVL7A1L3X0 281 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 AQP7P3A6NL99 342 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 FAM220BPB1ANY3 271 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 LYZL6O75951 148 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 CD3EP07766 207 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 PTNP21246 168 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 GTF2E2P29084 291 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 NUDT2P50583 147 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 CDH12P55289 794 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 RPS4XP62701 263 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 PPP2R2BQ00005 443 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 NPTX1Q15818 432 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 ENTPD8Q5MY95 495 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 NCMAPQ5T1S8 102 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 FBXW9Q5XUX1 488 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 C6orf89Q6UWU4 347 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 CASP12Q6UXS9 341 aa12.4□□□□□ -0.42
CCHCR1-211ENST00000467553 Q71RC1 249 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms