RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SLC25A19Q9HC21 320 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 ANO10Q9NW15 660 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 VNN3Q9NY84 501 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 IL17CQ9P0M4 197 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 COPS7AQ9UBW8 275 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 PISDQ9UG56 409 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 HMGXB4Q9UGU5 601 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 IL19Q9UHD0 177 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 FAM153AQ9UHL3 310 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 ERVW-1Q9UQF0 538 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 KIF3AQ9Y496 699 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 U3KQA8 63 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 UNC79Q9P2D8 2635 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 DCHS2Q6V1P9 2916 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 MYO9AB2RTY4 2548 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 AKAP9Q99996 3911 aa2.39□□□□□ -2.03
XRN1-206ENST00000467077 GOLGA6L7A0A1B0GV03 622 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 EFCAB7A8K855 629 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 C10orf142B7Z368 130 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 TSPAN2O60636 221 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 SLC4A1P02730 911 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 CSF2P04141 144 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 FCER2P06734 321 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 GAP43P17677 238 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 HNRNPA2B1P22626 353 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 AHCYP23526 432 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 AKT2P31751 481 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 TRIM23P36406 574 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 MDH2P40926 338 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 RGRP47804 291 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 FNTAP49354 379 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 CASP4P49662 377 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 STK19P49842 368 aaPredicted RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 NDST1P52848 882 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 RPS4XP62701 263 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 CCL7P80098 99 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 NUCB2P80303 420 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 CDKL1Q00532 357 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 KLRB1Q12918 225 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 C1orf61Q13536 156 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 FZD2Q14332 565 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 GSG1Q2KHT4 349 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 ZNF699Q32M78 642 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 CNPY1Q3B7I2 92 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 UNC50Q53HI1 259 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 CMPK2Q5EBM0 449 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 RAB12Q6IQ22 244 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 STEAP1BQ6NZ63 245 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 GCNT7Q6ZNI0 430 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 TIFABQ6ZNK6 161 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 BNIPLQ7Z465 357 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 PARGQ86W56 976 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 BATF2Q8N1L9 274 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 ARHGAP18Q8N392 663 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 ZNF557Q8N988 423 aaPredicted RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 Q8N9G6 341 aaPredicted RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 OR4F5Q8NH21 305 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 RNF139Q8WU17 664 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 NDRG1Q92597 394 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 P3H4Q92791 437 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 NAT6Q93015 286 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 TMEM159Q96B96 161 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 CATSPER2Q96P56 530 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 TMEM237Q96Q45 408 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 LLPHQ9BRT6 129 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 TTYH2Q9BSA4 534 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 PAXXQ9BUH6 204 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 DUSP16Q9BY84 665 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 IL1RL2Q9HB29 575 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 ELL3Q9HB65 397 aaPredicted RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 SYTL2Q9HCH5 934 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 DYRK4Q9NR20 520 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 ERVK-18Q9QC07 812 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 SPASTQ9UBP0 616 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 EIF3KQ9UBQ5 218 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 APOBEC3BQ9UH17 382 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 MLXQ9UH92 298 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 MED13Q9UHV7 2174 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 DNPEPQ9ULA0 475 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 TP53TG5Q9Y2B4 290 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 RPH3AQ9Y2J0 694 aaPredicted RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 CENPEQ02224 2701 aa2.38□□□□□ -2.03
XRN1-206ENST00000467077 ANKRD17O75179 2603 aaKnown RBP2.38□□□□□ -2.03
XRN1-206ENST00000467077 KNL1Q8NG31 2342 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 PRRC2CQ9Y520 2896 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 UNC13CQ8NB66 2214 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 ZFHX3Q15911 3703 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 TACC2O95359 2948 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 ICE1Q9Y2F5 2266 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 SPTY2D1-AS1A0A0U1RR47 76 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 A0A0U1RRA0 63 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 WI2-2373I1.2A0A1W2PRP0 233 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 TMEM89A2RUT3 159 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 D6RAR5 112 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 K7EM74 188 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 KPNA3O00505 521 aaPredicted RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 SH2D1BO14796 132 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 SYNGR4O95473 234 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 ALPPP05187 535 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 APRTP07741 180 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms