RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 CR1LQ2VPA4 569 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 NIPAL3Q6P499 406 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 ZNF836Q6ZNA1 936 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 ZNF621Q6ZSS3 439 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 EPHX4Q8IUS5 362 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 PEX5LQ8IYB4 626 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 ZNF440Q8IYI8 595 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 LRRC34Q8IZ02 419 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 CADM2Q8N3J6 435 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 ZNF540Q8NDQ6 660 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 TAPBPLQ9BX59 468 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 NELFAQ9H3P2 528 aa16.35■□□□□ 0.21
SRSF4-202ENST00000466448 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.35■□□□□ 0.21
SRSF4-202ENST00000466448 A8MVM7 634 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 FRS3O43559 492 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 VAMP5O95183 116 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 IGLV1-44P01699 117 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 PGRP06401 933 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 ALDOCP09972 364 aaKnown RBP16.34■□□□□ 0.21
SRSF4-202ENST00000466448 PAX7P23759 505 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 IL12AP29459 219 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 SLC1A6P48664 564 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 IDH3GP51553 393 aaPredicted RBP16.34■□□□□ 0.21
SRSF4-202ENST00000466448 C1orf140Q5VVS0 124 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 PRAMEF8Q5VWM4 474 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 PRAMEF7Q5VXH5 474 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 WBP2NLQ6ICG8 309 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 VRK2Q86Y07 508 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 OR52P1PQ8NH57 321 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
SRSF4-202ENST00000466448 ZNF317Q96PQ6 595 aaPredicted RBP16.34■□□□□ 0.21
SRSF4-202ENST00000466448 DSPPQ9NZW4 1301 aa16.34■□□□□ 0.21
SRSF4-202ENST00000466448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.33■□□□□ 0.22e-8■■■□□ 16.1
SRSF4-202ENST00000466448 BIRC5O15392 142 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 COPZ1P61923 177 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 VSNL1P62760 191 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 HGFACQ04756 655 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 ZSWIM7Q19AV6 140 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 C3orf36Q3SXR2 165 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 LIN52Q52LA3 116 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 OGFOD2Q6N063 350 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 MYPOPQ86VE0 399 aaPredicted RBP16.33■□□□□ 0.2
SRSF4-202ENST00000466448 NUP37Q8NFH4 326 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 OR52E6Q96RD3 313 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 RAB1BQ9H0U4 201 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 MEAF6Q9HAF1 191 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 HAO1Q9UJM8 370 aa16.33■□□□□ 0.2
SRSF4-202ENST00000466448 OR6C65A6NJZ3 312 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 NPIPB7O75200 414 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 SNUPNO95149 360 aaKnown RBP16.32■□□□□ 0.2
SRSF4-202ENST00000466448 STAMBPO95630 424 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 IGKV3-15P01624 115 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 CELA3BP08861 270 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 TFPTP0C1Z6 253 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 PRG2P13727 222 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 DAOP14920 347 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 GIFP27352 417 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 IL2RGP31785 369 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 MVDP53602 400 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 ROR2Q01974 943 aaKnown RBP16.32■□□□□ 0.2
SRSF4-202ENST00000466448 LIPNQ5VXI9 398 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 MALRD1Q5VYJ5 2156 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 ZCCHC24Q8N2G6 241 aaKnown RBP16.32■□□□□ 0.2
SRSF4-202ENST00000466448 FAM169BQ8N8A8 192 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 OR4F15Q8NGB8 312 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 LINC00470Q9BZP3 86 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 ZNF442Q9H7R0 627 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 SLC6A13Q9NSD5 602 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 PNPOQ9NVS9 261 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 AIG1Q9NVV5 245 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 PRDM4Q9UKN5 801 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 RASD1Q9Y272 281 aa16.32■□□□□ 0.2
SRSF4-202ENST00000466448 TMEM229AB2RXF0 380 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 FTCDNL1E5RQL4 147 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 TACSTD2P09758 323 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 BGNP21810 368 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 THBS4P35443 961 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 SH3BGRP55822 239 aaPredicted RBP16.31■□□□□ 0.2
SRSF4-202ENST00000466448 LRRC74AQ0VAA2 488 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 RNF220Q5VTB9 566 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 KDM8Q8N371 416 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 CLIP4Q8N3C7 705 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 SVOPLQ8N434 492 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 AENQ8WTP8 325 aaKnown RBP16.31■□□□□ 0.2
SRSF4-202ENST00000466448 C1orf159Q96HA4 380 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 DOK1Q99704 481 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 TMEM109Q9BVC6 243 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 MOV10Q9HCE1 1003 aaKnown RBP16.31■□□□□ 0.2
SRSF4-202ENST00000466448 P2RX2Q9UBL9 471 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 ZNF443Q9Y2A4 671 aaPredicted RBP16.31■□□□□ 0.2
SRSF4-202ENST00000466448 CHST2Q9Y4C5 530 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 ARFGEF3Q5TH69 2177 aa16.31■□□□□ 0.2
SRSF4-202ENST00000466448 A0A096LPI6 279 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 hCG_2039718K7EN88 272 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 LILRA1O75019 489 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 KRT75O95678 551 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 BCHEP06276 602 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 PNMTP11086 282 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 ETFAP13804 333 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 NCF2P19878 526 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms