RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 POC1BQ8TC44 478 aa15.29■□□□□ 0.04
EXOSC3-203ENST00000465229 TMEM234Q8WY98 164 aa15.29■□□□□ 0.04
EXOSC3-203ENST00000465229 C3orf49Q96BT1 292 aa15.29■□□□□ 0.04
EXOSC3-203ENST00000465229 DKKL1Q9UK85 242 aa15.29■□□□□ 0.04
EXOSC3-203ENST00000465229 SPENQ96T58 3664 aaKnown RBP15.29■□□□□ 0.04
EXOSC3-203ENST00000465229 IGSF10Q6WRI0 2623 aa15.29■□□□□ 0.04
EXOSC3-203ENST00000465229 TRAPPC13A5PLN9 417 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 SHISA8B8ZZ34 492 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 SOX14O95416 240 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 HPNP05981 417 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 HK1P19367 917 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 FPR3P25089 353 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 TACR3P29371 465 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 OMPP47874 163 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 GIPRP48546 466 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 SMSP52788 366 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 MEDAGQ5VYS4 303 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 ULK3Q6PHR2 472 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 YRDCQ86U90 279 aaKnown RBP15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 RNF113BQ8IZP6 322 aaKnown RBP15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 FAM26EQ8N5C1 309 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 DNAJA4Q8WW22 397 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 WBP1Q96G27 269 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 GPA33Q99795 319 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 CDCA4Q9BXL8 241 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 OR2B2Q9GZK3 357 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 KRCC1Q9NPI7 259 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 QPCTLQ9NXS2 382 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 RPS6KB2Q9UBS0 482 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 RPH3AQ9Y2J0 694 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 A0A1W2PPW3 197 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 FAM47E-STBD1D6RA91 191 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 ACOT7O00154 380 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 KLF4O43474 513 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 FREM3P0C091 2139 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 ZNF24P17028 368 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 EFNB1P98172 346 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 ST3GAL4Q11206 333 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 FOXF1Q12946 379 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 INAQ16352 499 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 TMEM44Q2T9K0 475 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 GLYR1Q49A26 553 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 GRINAQ7Z429 371 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 GTPBP8Q8N3Z3 284 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 FAM109AQ8N4B1 249 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 STX19Q8N4C7 294 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 OR5M1Q8NGP8 315 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 ZBTB8AQ96BR9 441 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 MRGPRX4Q96LA9 322 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 ZDHHC11Q9H8X9 412 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 SLC24A3Q9HC58 644 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 OSGIN1Q9UJX0 560 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 SLC7A7Q9UM01 511 aa15.28■□□□□ 0.04
EXOSC3-203ENST00000465229 ZNF407Q9C0G0 2248 aa15.27■□□□□ 0.04
EXOSC3-203ENST00000465229 SLC22A1O15245 554 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 EFNA2O43921 213 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 IGFBP1P08833 259 aaPredicted RBP15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 PSMB9P28065 219 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 ADH6P28332 368 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 C21orf33P30042 268 aaPredicted RBP15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 EIF1P41567 113 aaKnown RBP15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 PCYT1AP49585 367 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 NUDT6P53370 316 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 B3GALT5-AS1P59052 145 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 GINS1Q14691 196 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 SLC10A1Q14973 349 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 CTF1Q16619 201 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 ALG10BQ5I7T1 473 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 WIPI1Q5MNZ9 446 aaPredicted RBP15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 RNLSQ5VYX0 342 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 PRICKLE2Q7Z3G6 844 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 ATG4DQ86TL0 474 aaPredicted RBP15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 ADGRG3Q86Y34 549 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 CLDN22Q8N7P3 220 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 OR14L1PQ8NHC6 308 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 DTNBP1Q96EV8 351 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 UBL7Q96S82 380 aaPredicted RBP15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 PRSS27Q9BQR3 290 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 PRRG3Q9BZD7 231 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 DEFB127Q9H1M4 99 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 ACKR4Q9NPB9 350 aa15.27■□□□□ 0.03
EXOSC3-203ENST00000465229 NCKAP5O14513 1909 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 OR2M5A3KFT3 312 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 TFECO14948 347 aaPredicted RBP15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 CHP2O43745 196 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 WISP2O76076 250 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 STSP08842 583 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 APOBEC1P41238 236 aaKnown RBP15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 HTR3AP46098 478 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 POLR2HP52434 150 aaKnown RBP15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 KLRB1Q12918 225 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 RAET1LQ5VY80 246 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 SLC27A4Q6P1M0 643 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 LINC00114Q6XXX2 140 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 WDR88Q6ZMY6 472 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 P2RY8Q86VZ1 359 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 KIF18BQ86Y91 864 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 NKAIN4Q8IVV8 208 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 SIAH3Q8IW03 269 aa15.26■□□□□ 0.03
EXOSC3-203ENST00000465229 TEX47Q8TBZ9 253 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms