RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ZNF730Q6ZMV8 503 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 TMPPEQ6ZT21 453 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 OR2T29Q8NH02 315 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 TMEM239Q8WW34 195 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 ACOT11Q8WXI4 607 aaPredicted RBP15.61■□□□□ 0.09
CPSF4-209ENST00000465132 WFDC6Q9BQY6 131 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 PRR14Q9BWN1 585 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 PRRG4Q9BZD6 226 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 NDEL1Q9GZM8 345 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 CALHM2Q9HA72 323 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 TMEM5Q9Y2B1 443 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 ZNF175Q9Y473 711 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 TMEM72A0PK05 275 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 A6NNC1 897 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 KDM4EB2RXH2 506 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-209ENST00000465132 KLK2P20151 261 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 FASP25445 335 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 TIMP3P35625 211 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 YAP1P46937 504 aaKnown RBP15.6■□□□□ 0.09
CPSF4-209ENST00000465132 EIF1AXP47813 144 aaKnown RBP15.6■□□□□ 0.09
CPSF4-209ENST00000465132 CLDN15P56746 228 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 CCNIQ14094 377 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 KPNB1Q14974 876 aaKnown RBP15.6■□□□□ 0.09
CPSF4-209ENST00000465132 FBXL19-AS1Q494R0 122 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 FGD3Q5JSP0 725 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 FAM69AQ5T7M9 428 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 EEF1A1P5Q5VTE0 462 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 OR2A2Q6IF42 318 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 CDC20BQ86Y33 519 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 MFSD8Q8NHS3 518 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 FAM222BQ8WU58 562 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 OSTF1Q92882 214 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 RNASE6Q93091 150 aaKnown RBP15.6■□□□□ 0.09
CPSF4-209ENST00000465132 LRRC46Q96FV0 321 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 BDH2Q9BUT1 245 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 TMEM185BQ9H7F4 350 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 DNAJB9Q9UBS3 223 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 CORINQ9Y5Q5 1042 aa15.6■□□□□ 0.09
CPSF4-209ENST00000465132 MT-ND1P03886 318 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 HIST1H2ABP04908 130 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 DNASE1P24855 282 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 DIO1P49895 249 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 HIST3H2AQ7L7L0 130 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 P4HA3Q7Z4N8 544 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 GGNQ86UU5 652 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 SLC43A2Q8N370 569 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 C10orf53Q8N6V4 93 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 OR10D3Q8NH80 312 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 HIST1H2ACQ93077 130 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 DHRS1Q96LJ7 313 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 ZFP3Q96NJ6 502 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 UCN2Q96RP3 112 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 TM9SF2Q99805 663 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 KLHDC3Q9BQ90 382 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 TACO1Q9BSH4 297 aaKnown RBP15.59■□□□□ 0.09
CPSF4-209ENST00000465132 ZNF426Q9BUY5 554 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 ASPNQ9BXN1 380 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 GLRX2Q9NS18 164 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 C6orf203Q9P0P8 240 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-209ENST00000465132 ZNF629Q9UEG4 869 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-209ENST00000465132 EDARQ9UNE0 448 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 PLEKHA6Q9Y2H5 1048 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 TESMINQ9Y4I5 508 aa15.59■□□□□ 0.09
CPSF4-209ENST00000465132 ZNF469Q96JG9 3925 aaPredicted RBP15.59■□□□□ 0.09
CPSF4-209ENST00000465132 ANKHD1Q8IWZ3 2542 aaKnown RBP15.58■□□□□ 0.09
CPSF4-209ENST00000465132 A0A0J9YW62 118 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 H0YHG0 523 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 TNFRSF11BO00300 401 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 TNFSF11O14788 317 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 FFAR1O14842 300 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 EFNA2O43921 213 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 NPIPB7O75200 414 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 E2F6O75461 281 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 VAMP5O95183 116 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 IL2RAP01589 272 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 IL11P20809 199 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 ENPP1P22413 925 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 HMGA2P52926 109 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 CLDN20P56880 219 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 OR2B6P58173 313 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 DAZAP2Q15038 168 aaPredicted RBP15.58■□□□□ 0.08
CPSF4-209ENST00000465132 RNPS1Q15287 305 aaKnown RBP15.58■□□□□ 0.08
CPSF4-209ENST00000465132 ANKDD1AQ495B1 522 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 MBOAT2Q6ZWT7 520 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 PIGXQ8TBF5 258 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 WNT2BQ93097 391 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 ALPK1Q96QP1 1244 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 DENND2DQ9H6A0 471 aaPredicted RBP15.58■□□□□ 0.08
CPSF4-209ENST00000465132 RHCGQ9UBD6 479 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 FOXD3Q9UJU5 478 aaPredicted RBP15.58■□□□□ 0.08
CPSF4-209ENST00000465132 AKAP6Q13023 2319 aa15.58■□□□□ 0.08
CPSF4-209ENST00000465132 ARHGAP21Q5T5U3 1957 aa15.57■□□□□ 0.08
CPSF4-209ENST00000465132 CD8B2A6NJW9 211 aa15.57■□□□□ 0.08
CPSF4-209ENST00000465132 SLC22A20A6NK97 555 aa15.57■□□□□ 0.08
CPSF4-209ENST00000465132 J3KTA2 159 aa15.57■□□□□ 0.08
CPSF4-209ENST00000465132 CLOCKO15516 846 aa15.57■□□□□ 0.08
CPSF4-209ENST00000465132 PRSS23O95084 383 aa15.57■□□□□ 0.08
CPSF4-209ENST00000465132 FOXD4Q12950 439 aaPredicted RBP15.57■□□□□ 0.08
CPSF4-209ENST00000465132 IQCCQ4KMZ1 466 aa15.57■□□□□ 0.08
CPSF4-209ENST00000465132 NSUN5P2Q63ZY6 315 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms