RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 P2RY13Q9BPV8 354 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 AZI2Q9H6S1 392 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 SLC25A22Q9H936 323 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 HOXC10Q9NYD6 342 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 SEC14L3Q9UDX4 400 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 HPCAL4Q9UM19 191 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 ASB3Q9Y575 518 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 N6AMT1Q9Y5N5 214 aa2.84□□□□□ -1.95
CLK1-208ENST00000464454 PSMB11A5LHX3 300 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 OR52A4PA6NMU1 304 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 USP27XA6NNY8 438 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 A8MUA0 341 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 GFYI3L273 518 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 HSD17B6O14756 317 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 PALMO75781 387 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 ZNF853P0CG23 659 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 ELK1P19419 428 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 CD1CP29017 333 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 OPRD1P41143 372 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 ARRB1P49407 418 aaPredicted RBP2.83□□□□□ -1.96
CLK1-208ENST00000464454 CAV2P51636 162 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 SEC61GP60059 68 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 CDK16Q00536 496 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 PLD1Q13393 1074 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 DDX39BQ13838 428 aaKnown RBP2.83□□□□□ -1.96
CLK1-208ENST00000464454 PHYHD1Q5SRE7 291 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 C1orf100Q5SVJ3 147 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 OR2A2Q6IF42 318 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 Q6ZN92 141 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 NBPF5PQ86XG9 351 aaPredicted RBP2.83□□□□□ -1.96
CLK1-208ENST00000464454 NUDCD3Q8IVD9 361 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 SLC34A3Q8N130 599 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 NAT9Q9BTE0 207 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 ACTR6Q9GZN1 396 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 C20orf85Q9H1P6 137 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 NIPAL2Q9H841 368 aa2.83□□□□□ -1.96
CLK1-208ENST00000464454 TDRD6O60522 2096 aaKnown RBP2.83□□□□□ -1.96
CLK1-208ENST00000464454 NSG1A0A0A6YYJ2 146 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 CCDC182A6NF36 153 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 OR5B21A6NL26 309 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 H0Y8G0 127 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 TBPP20226 339 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 HTR1EP28566 365 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 PRDX3P30048 256 aaKnown RBP2.82□□□□□ -1.96
CLK1-208ENST00000464454 GYG1P46976 350 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 SULT1E1P49888 294 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 DLX1P56177 255 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 NUP107P57740 925 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 TAS2R19P59542 299 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 PRPS1P60891 318 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 ZNF763Q0D2J5 394 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 C6orf226Q5I0X4 101 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 CASC10Q5T4H9 136 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 IL34Q6ZMJ4 242 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 RNF165Q6ZSG1 346 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 PRSS41Q7RTY9 318 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 PLA2G4DQ86XP0 818 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 PNKDQ8N490 385 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 DCAF4L2Q8NA75 395 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 FNDC5Q8NAU1 212 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 OR6C4Q8NGE1 309 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 NEIL3Q8TAT5 605 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 NT5C3BQ969T7 300 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 IFT74Q96LB3 600 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 ZNF641Q96N77 438 aaPredicted RBP2.82□□□□□ -1.96
CLK1-208ENST00000464454 RIOK1Q9BRS2 568 aaKnown RBP2.82□□□□□ -1.96
CLK1-208ENST00000464454 TRIM62Q9BVG3 475 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 PPA2Q9H2U2 334 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 NANOGQ9H9S0 305 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 KCNIP1Q9NZI2 227 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 ZNF639Q9UID6 485 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 KCNIP3Q9Y2W7 256 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 NEUROG3Q9Y4Z2 214 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 FANCIQ9NVI1 1328 aa2.82□□□□□ -1.96
CLK1-208ENST00000464454 FOXE1O00358 373 aaPredicted RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 AGPAT2O15120 278 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 TOM1O60784 492 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 ABOP16442 354 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 NCF2P19878 526 aaPredicted RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 CMA1P23946 247 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 TAGLN2P37802 199 aaKnown RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 GSSP48637 474 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 ATP5IP56385 69 aaPredicted RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 SCRN3Q0VDG4 424 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 PSG7Q13046 419 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 MRPL28Q13084 256 aaKnown RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 CAPRIN1Q14444 709 aaKnown RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 GNMTQ14749 295 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 ATP6AP1Q15904 470 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 NRF1Q16656 503 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 RABL6Q3YEC7 729 aaPredicted RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 BOLA3Q53S33 107 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 ENPP6Q6UWR7 440 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 H2BFWTQ7Z2G1 175 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 UBE2J2Q8N2K1 259 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 ACOT4Q8N9L9 421 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 C20orf203Q8NBC4 194 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 FAM151AQ8WW52 585 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 N4BP2L2Q92802 583 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms