RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PPP5CP53041 499 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 HNRNPA0Q13151 305 aaKnown RBP11.62□□□□□ -0.55
VAPB-203ENST00000463370 FAM198BQ6UWH4 519 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 TMPRSS11AQ6ZMR5 421 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 OR5J2Q8NH18 312 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 KCTD7Q96MP8 289 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 TSPAN32Q96QS1 320 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 MARCH7Q9H992 704 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 C12orf10Q9HB07 376 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 RPRD1BQ9NQG5 326 aaKnown RBP11.62□□□□□ -0.55
VAPB-203ENST00000463370 POLE4Q9NR33 117 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 TMED7-TICAM2A0A0A6YYA0 188 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 TRDV1A0A1B0GX56 115 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 GABRPO00591 440 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 PYCR1P32322 319 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 RORCP51449 518 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 NANOGNBQ7Z5D8 188 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 LAX1Q8IWV1 398 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 FAM83FQ8NEG4 500 aaPredicted RBP11.62□□□□□ -0.55
VAPB-203ENST00000463370 OR6K6Q8NGW6 343 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 CHPT1Q8WUD6 406 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 MR1Q95460 341 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 SLC25A36Q96CQ1 311 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 ULBP3Q9BZM4 244 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 PPIL3Q9H2H8 161 aaKnown RBP11.62□□□□□ -0.55
VAPB-203ENST00000463370 SMURF1Q9HCE7 757 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 TAS2R5Q9NYW4 299 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 MED11Q9P086 117 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 MYOTQ9UBF9 498 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 PLEKHB1Q9UF11 243 aaPredicted RBP11.62□□□□□ -0.55
VAPB-203ENST00000463370 COPS3Q9UNS2 423 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 TMED7Q9Y3B3 224 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
VAPB-203ENST00000463370 LNP1A1A4G5 178 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 SHISA8B8ZZ34 492 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 MASP2O00187 686 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 RNF13O43567 381 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 NPIPB7O75200 414 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 KLF7O75840 302 aaPredicted RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 NCR1O76036 304 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 LDOC1O95751 146 aaPredicted RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 ZNF12P17014 697 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 FGF9P31371 208 aaPredicted RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 S100A5P33763 92 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 DIO1P49895 249 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 ANGPT1Q15389 498 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 INPP5JQ15735 1006 aaPredicted RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 TP53I3Q53FA7 332 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 CCDC157Q569K6 752 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 MESTQ5EB52 335 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 LINC01590Q5TEZ4 76 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 ARSKQ6UWY0 536 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 LYPD8Q6UX82 237 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 CCDC190Q86UF4 302 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 OR10G3Q8NGC4 313 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 RHBDD1Q8TEB9 315 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 ABTB1Q969K4 478 aaPredicted RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 TAS2R10Q9NYW0 307 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 ZNF229Q9UJW7 825 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 PEX16Q9Y5Y5 336 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 A0A075B6Q4 140 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 TRAV36DV7A0A075B6V5 113 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 SLC35F4A4IF30 521 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 TBX1O43435 398 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 IL1AP01583 271 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 IL11P20809 199 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 GTF2E2P29084 291 aaKnown RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 GRPRP30550 384 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 SDHAP31040 664 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 TNFSF8P32971 234 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 POLR2HP52434 150 aaKnown RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 MC2RQ01718 297 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 TRA2AQ13595 282 aaKnown RBP eCLIP11.61□□□□□ -0.553e-6■□□□□ 11.2
VAPB-203ENST00000463370 EFR3AQ14156 821 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 GGTLC2Q14390 218 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 PCOLCEQ15113 449 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 PON3Q15166 354 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 ISXQ2M1V0 245 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 ARL9Q6T311 187 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 MARCH9Q86YJ5 346 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 EXD3Q8N9H8 876 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 CNN2Q99439 309 aaKnown RBP11.61□□□□□ -0.55
VAPB-203ENST00000463370 FKRPQ9H9S5 495 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 ABCB10Q9NRK6 738 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 INPP5EQ9NRR6 644 aa11.61□□□□□ -0.55
VAPB-203ENST00000463370 PRR32B1ATL7 298 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 C11orf98E9PRG8 122 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 RGS5O15539 181 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 PLGP00747 810 aaPredicted RBP11.6□□□□□ -0.55
VAPB-203ENST00000463370 MT-ND5P03915 603 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 DNASE1L3Q13609 305 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 CLPPQ16740 277 aaPredicted RBP11.6□□□□□ -0.55
VAPB-203ENST00000463370 C11orf91Q3C1V1 193 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 FAM27D1Q5T7N8 215 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 DBX2Q6ZNG2 339 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 VASH1Q7L8A9 365 aaPredicted RBP11.6□□□□□ -0.55
VAPB-203ENST00000463370 GRINAQ7Z429 371 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 ZNF511Q8NB15 262 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 GALNT6Q8NCL4 622 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms