RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 LRCH4O75427 683 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 CLDN11O75508 207 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 CEACAM4O75871 244 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 RPP14O95059 124 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 NSA2O95478 260 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 HPRP00739 348 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 IGHV2-70P01814 119 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 SBK2P0C263 348 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 HSMCR30P0CW71 290 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MBL2P11226 248 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 GP1BBP13224 206 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 UCP1P25874 307 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 CD40LGP29965 261 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MIPP30301 263 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 LCN1P31025 176 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 TNFRSF4P43489 277 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 NDST2P52849 883 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 CDH13P55290 713 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 XGP55808 180 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 NTHL1P78549 312 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 CACNG1Q06432 222 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 SULT2A1Q06520 285 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MZT1Q08AG7 82 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 STX5Q13190 355 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 DYNC1I2Q13409 638 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 RUNX3Q13761 415 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PDE7AQ13946 482 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 UAP1Q16222 522 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 SGCAQ16586 387 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 TMEM41BQ5BJD5 291 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 BEX5Q5H9J7 111 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 EOGTQ5NDL2 527 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 RABGAP1LQ5R372 815 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 LDLRAP1Q5SW96 308 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PDZK1Q5T2W1 519 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PLCXD3Q63HM9 321 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 LRRC66Q68CR7 880 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 NCR3LG1Q68D85 454 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 NEPROQ6NW34 567 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 TTC33Q6PID6 262 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 VITQ6UXI7 678 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 LRRC31Q6UY01 552 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 CYP4V2Q6ZWL3 525 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 NDUFAF7Q7L592 441 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PRSS42Q7Z5A4 293 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ABI3BPQ7Z7G0 1075 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 LUZP2Q86TE4 346 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 YRDCQ86U90 279 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 TAC4Q86UU9 113 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 SLC51BQ86UW2 128 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 HPS6Q86YV9 775 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MMD2Q8IY49 270 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ZNF683Q8IZ20 524 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 UMODL1-AS1Q8N2C9 162 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 LIX1Q8N485 282 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 TBC1D19Q8N5T2 526 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 SNX31Q8N9S9 440 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 THAP8Q8NA92 274 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MINDY2Q8NBR6 621 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 TMEM185AQ8NFB2 350 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 OR9K2Q8NGE7 335 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 OR8J2Q8NGG1 315 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 OR52B4Q8NGK2 314 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 OR10S1Q8NGN2 331 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ZNF564Q8TBZ8 553 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 DTX3LQ8TDB6 740 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 ING5Q8WYH8 240 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 FAF2Q96CS3 445 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 BSCL2Q96G97 398 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 C4orf45Q96LM5 186 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 LRRC3BQ96PB8 259 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MCEEQ96PE7 176 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ZNF317Q96PQ6 595 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 CYP2S1Q96SQ9 504 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 OVOL2Q9BRP0 275 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ZNF670Q9BS34 389 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ATG10Q9H0Y0 220 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 UBQLN3Q9H347 655 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 METTL8Q9H825 291 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 RNPEPL1Q9HAU8 725 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ZNF275Q9NSD4 429 aaPredicted RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 PNPLA3Q9NST1 481 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PIGVQ9NUD9 493 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 OLAHQ9NV23 265 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MRPL22Q9NWU5 206 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 EURLQ9NYK6 297 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 RNF14Q9UBS8 474 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 OR12D3Q9UGF7 316 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 UBQLN2Q9UHD9 624 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 DCDC2Q9UHG0 476 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ANAPC7Q9UJX3 599 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PSMD13Q9UNM6 376 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PLA2G4CQ9UP65 541 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 MGAT4BQ9UQ53 548 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 SAMHD1Q9Y3Z3 626 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 WIPI2Q9Y4P8 454 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ALG6Q9Y672 507 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 COL6A3P12111 3177 aa3.34□□□□□ -1.88
UBA3-204ENST00000461522 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms