RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 NANSQ9NR45 359 aa2.35□□□□□ -2.03
RFC4-211ENST00000460408 MARCH5Q9NX47 278 aa2.35□□□□□ -2.03
RFC4-211ENST00000460408 SMPD3Q9NY59 655 aaPredicted RBP2.35□□□□□ -2.03
RFC4-211ENST00000460408 MEMO1Q9Y316 297 aa2.35□□□□□ -2.03
RFC4-211ENST00000460408 AKAP12Q02952 1782 aa2.35□□□□□ -2.03
RFC4-211ENST00000460408 MYO5BQ9ULV0 1848 aa2.35□□□□□ -2.03
RFC4-211ENST00000460408 THSD7BQ9C0I4 1608 aa2.35□□□□□ -2.03
RFC4-211ENST00000460408 NAIPQ13075 1403 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 LTBP1Q14766 1721 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 A0A0G2JRQ6 117 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 ZNF264O43296 627 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 RHOBTB1O94844 696 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 CAPN1P07384 714 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 ALOX5P09917 674 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 ZNF44P15621 663 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 PCMT1P22061 227 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 GLRA2P23416 452 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 HOXD10P28358 340 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 YWHABP31946 246 aaKnown RBP2.34□□□□□ -2.03
RFC4-211ENST00000460408 MAP3K8P41279 467 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 TDO2P48775 406 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 GBX2P52951 348 aaPredicted RBP2.34□□□□□ -2.03
RFC4-211ENST00000460408 RIPK4P57078 832 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 KRTAP10-1P60331 282 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 RPS8P62241 208 aaKnown RBP2.34□□□□□ -2.03
RFC4-211ENST00000460408 GNB2P62879 340 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 CHIT1Q13231 466 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 GRB7Q14451 532 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 TRIM16LQ309B1 348 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 KLF17Q5JT82 389 aaPredicted RBP2.34□□□□□ -2.03
RFC4-211ENST00000460408 EOGTQ5NDL2 527 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 C1orf220Q5T0J3 134 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 BEND3Q5T5X7 828 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 CCDC137Q6PK04 289 aaKnown RBP2.34□□□□□ -2.03
RFC4-211ENST00000460408 NLRP9Q7RTR0 991 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 FAM220AQ7Z4H9 259 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 VSTM4Q8IW00 320 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 TBC1D21Q8IYX1 336 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 OR1E3Q8WZA6 343 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 OR51J1Q9H342 316 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 LRRN3Q9H3W5 708 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 PTGES2Q9H7Z7 377 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 VCPKMTQ9H867 229 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 POPDC2Q9HBU9 364 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 PHF11Q9UIL8 331 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 TIMM10BQ9Y5J6 103 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 SLCO1B1Q9Y6L6 691 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 UNC80Q8N2C7 3258 aa2.34□□□□□ -2.03
RFC4-211ENST00000460408 ATRXP46100 2492 aa2.34□□□□□ -2.04
RFC4-211ENST00000460408 PHRF1Q9P1Y6 1649 aaKnown RBP2.34□□□□□ -2.04
RFC4-211ENST00000460408 NRXN3Q9Y4C0 1643 aa2.34□□□□□ -2.04
RFC4-211ENST00000460408 ZNF318Q5VUA4 2279 aa2.34□□□□□ -2.04
RFC4-211ENST00000460408 NRXN1Q9ULB1 1477 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 IGKV1D-8A0A087WSZ0 117 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 A0A1B0GUS0 222 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 TRDCB7Z8K6 153 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 F5H6K3 240 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 PRKAB2O43741 272 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 OR10H3O60404 316 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 LGALS2P05162 132 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 ELK1P19419 428 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 NPR2P20594 1047 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 COX5AP20674 150 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 IMPDH1P20839 514 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 EFNB2P52799 333 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 PLK1P53350 603 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 BIDP55957 195 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 KLRC3Q07444 240 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 CCDC173Q0VFZ6 552 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 IL24Q13007 206 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 IL17AQ16552 155 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 OTPQ5XKR4 325 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 ACOT7LQ6ZUV0 252 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 CCDC80Q76M96 950 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 ARCQ7LC44 396 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 NRMQ8IXM6 262 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 PRR22Q8IZ63 422 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 MTURNQ8N3F0 131 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 TMEM252Q8N6L7 170 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 ATP6V0D2Q8N8Y2 350 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 CCDC71LQ8N9Z2 235 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 OR52I1Q8NGK6 324 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 OR9A1PQ8NGU1 263 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 SLC41A3Q96GZ6 507 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 PGLYRP4Q96LB8 373 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 ARHGDIGQ99819 225 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 MAGT1Q9H0U3 335 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 ZDHHC11Q9H8X9 412 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 CD274Q9NZQ7 290 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 LCMT1Q9UIC8 334 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 LRRK1Q38SD2 2015 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 NHSQ6T4R5 1651 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 VCANP13611 3396 aa2.33□□□□□ -2.04
RFC4-211ENST00000460408 ZDBF2Q9HCK1 2354 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 MUC6Q6W4X9 2439 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 CLTCL1P53675 1640 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 IQGAP3Q86VI3 1631 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 FMN2Q9NZ56 1722 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 COL18A1P39060 1754 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 TRAV26-1A0A087WT03 109 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms