RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 SYT14Q8NB59 555 aa8.96□□□□□ -0.97
EPB41-208ENST00000460378 ARL8BQ9NVJ2 186 aa8.96□□□□□ -0.97
EPB41-208ENST00000460378 IGHV3-15A0A0B4J1V0 119 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 DPPA5A6NC42 116 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 ZNF432O94892 652 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 COX4I1P13073 169 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 FUT1P19526 365 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 MTPNP58546 118 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 RAC3P60763 192 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 SPTBN1Q01082 2364 aaKnown RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 SLC27A4Q6P1M0 643 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 NUP210Q8TEM1 1887 aaPredicted RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 ZDHHC18Q9NUE0 388 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 GPR55Q9Y2T6 319 aaPredicted RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 LOC102723996A0A087X1L8 192 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 A0A1W2PQ09 198 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 CASC3O15234 703 aaKnown RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 PRKCAP17252 672 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 MSX2P35548 267 aaPredicted RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 SRP9P49458 86 aaKnown RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 BCL2A1Q16548 175 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 RGS21Q2M5E4 152 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 ZIK1Q3SY52 487 aaPredicted RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 ZDHHC13Q8IUH4 622 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 OR52J3Q8NH60 311 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 OR51A7Q8NH64 312 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 OXGR1Q96P68 337 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 MS4A7Q9GZW8 240 aaPredicted RBP8.96□□□□□ -0.98
EPB41-208ENST00000460378 C14orf119Q9NWQ9 140 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 OR5V1Q9UGF6 321 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 CD2P06729 351 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 OR8G3PP0DMU2 310 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 CBLBQ13191 982 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 RIPK1Q13546 671 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 DUSP5Q16690 384 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 DGUOKQ16854 277 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 AMIGO2Q86SJ2 522 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 DTWD1Q8N5C7 304 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 C19orf18Q8NEA5 215 aa8.96□□□□□ -0.98
EPB41-208ENST00000460378 FGF4P08620 206 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 CFL1P23528 166 aaKnown RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 CD40LGP29965 261 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 MAGEA3P43357 314 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 GMFBP60983 142 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 LSM3P62310 102 aaKnown RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 SPANXN2Q5MJ10 180 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 LPCAT4Q643R3 524 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 THEM6Q8WUY1 208 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 COQ8BQ96D53 544 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 GIMAP2Q9UG22 337 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 CKAP5Q14008 2032 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 A0A096LPE4 126 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 A0A1W2PPZ6 126 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 MT-ATP6P00846 226 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 ZNF17P17021 662 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 COL8A1P27658 744 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 BIDP55957 195 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 LIPEQ05469 1076 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 SLC2A7Q6PXP3 512 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 LRRC18Q8N456 261 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 UBASH3BQ8TF42 649 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 TSEN15Q8WW01 171 aaKnown RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 H1FXQ92522 213 aaKnown RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 MIB2Q96AX9 1013 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 CCDC115Q96NT0 180 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 ERMAPQ96PL5 475 aaPredicted RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 ASB4Q9Y574 426 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 PCDHGB1Q9Y5G3 927 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 IGLV3-12A0A075B6K2 115 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 CENPBD1B2RD01 187 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 PCGF2P35227 344 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 SNTB2Q13425 540 aaKnown RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 IL18R1Q13478 541 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 MPP2Q14168 576 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 TYW3Q6IPR3 259 aaKnown RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 PNLDC1Q8NA58 520 aaKnown RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 NODALQ96S42 347 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 TESMINQ9Y4I5 508 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 SRCAPQ6ZRS2 3230 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 SLC9A3P48764 834 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 Q0VFX4 171 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 PCLAFQ15004 111 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 CHRFAM7AQ494W8 412 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 ZFP62Q8NB50 900 aaPredicted RBP8.95□□□□□ -0.98
EPB41-208ENST00000460378 GIPC3Q8TF64 312 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 FAM168AQ92567 244 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 NRTNQ99748 197 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 NMUR2Q9GZQ4 415 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 COMMD4Q9H0A8 199 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 SPATA2Q9UM82 520 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 ZNF337Q9Y3M9 751 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 DNAJC15Q9Y5T4 150 aa8.95□□□□□ -0.98
EPB41-208ENST00000460378 GOSR1O95249 250 aa8.94□□□□□ -0.98
EPB41-208ENST00000460378 PTNP21246 168 aa8.94□□□□□ -0.98
EPB41-208ENST00000460378 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.94□□□□□ -0.98
EPB41-208ENST00000460378 SNTB1Q13884 538 aaKnown RBP8.94□□□□□ -0.98
EPB41-208ENST00000460378 ESCO2Q56NI9 601 aa8.94□□□□□ -0.98
EPB41-208ENST00000460378 GPR107Q5VW38 600 aa8.94□□□□□ -0.98
EPB41-208ENST00000460378 OR2T4Q8NH00 348 aa8.94□□□□□ -0.98
EPB41-208ENST00000460378 RCN3Q96D15 328 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms