RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-208	ENST00000460132	RGS8	P57771	180 aa	Predicted RBP	12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	GUCY1A3	Q02108	690 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	RBBP4	Q09028	425 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	OR1Q1	Q15612	314 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	DUSP7	Q16829	419 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	ZNF672	Q499Z4	452 aa	Predicted RBP	12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	NET1	Q7Z628	596 aa	Predicted RBP	12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	YTHDF3	Q7Z739	585 aa	Known RBP	12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	WDR31	Q8NA23	367 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	SLC38A4	Q969I6	547 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	FBXW5	Q969U6	566 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	SLCO5A1	Q9H2Y9	848 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	TMEM27	Q9HBJ8	222 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	ZNF701	Q9NV72	531 aa	Predicted RBP	12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	SEC14L4	Q9UDX3	406 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	TES	Q9UGI8	421 aa	Known RBP	12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	SLC13A4	Q9UKG4	626 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	RASD1	Q9Y272	281 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	ARID1A	O14497	2285 aa		12.84	□□□□□ -0.35
PLOD3-208	ENST00000460132	SHISA9	B4DS77	424 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	ABCD4	O14678	606 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	OPN1SW	P03999	348 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	SOD3	P08294	240 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	DANCR	P0C864	163 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	PAX1	P15863	534 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	MPG	P29372	298 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	SELENOP	P49908	381 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	GZMM	P51124	257 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	ZNF83	P51522	516 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	LGALS3BP	Q08380	585 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	KLF10	Q13118	480 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	FAM91A1	Q658Y4	838 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	NANOGP8	Q6NSW7	305 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	PRSS57	Q6UWY2	283 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	POMGNT2	Q8NAT1	580 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	GPR32P1	Q8NGA4	272 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	OR10A6	Q8NH74	314 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	RNF217	Q8TC41	542 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	SMAP2	Q8WU79	429 aa	Predicted RBP	12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	SLC47A1	Q96FL8	570 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	C18orf12	Q96KH6	178 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	C1QTNF6	Q9BXI9	259 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	AMBRA1	Q9C0C7	1298 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	CXorf56	Q9H5V9	222 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	NANOG	Q9H9S0	305 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	SAR1A	Q9NR31	198 aa		12.83	□□□□□ -0.36
PLOD3-208	ENST00000460132	CAD	P27708	2225 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	TRAV36DV7	A0A075B6V5	113 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132		A0A087WUJ7	227 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132		A0A0B4J2E0	115 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132		A0A1B0GX12	115 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132		M0R3H8	397 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	OR2T1	O43869	369 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	TMCC2	O75069	709 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	FZD7	O75084	574 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	LGI1	O95970	557 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	CDH2	P19022	906 aa	Predicted RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	GTF2E2	P29084	291 aa	Known RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	GRPR	P30550	384 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	CDH12	P55289	794 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	NCALD	P61601	193 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	RPS4X	P62701	263 aa	Known RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	TGFBR3	Q03167	851 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	CYLC2	Q14093	348 aa	Predicted RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	PGGHG	Q32M88	737 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	TRMT5	Q32P41	509 aa	Known RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	RABL3	Q5HYI8	236 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	FAM69A	Q5T7M9	428 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	NIPAL3	Q6P499	406 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	C5orf46	Q6UWT4	87 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	TMEM108	Q6UXF1	575 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	RANBP3L	Q86VV4	465 aa	Predicted RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	LRRC58	Q96CX6	371 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132		Q96MF0	132 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	MCHR1	Q99705	422 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	ARHGDIG	Q99819	225 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	SMR3A	Q99954	134 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	EVA1A	Q9H8M9	152 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	SLC17A5	Q9NRA2	495 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	CISD1	Q9NZ45	108 aa	Known RBP	12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	SELENON	Q9NZV5	590 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	KLHL14	Q9P2G3	628 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	B3GAT1	Q9P2W7	334 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	C2CD3	Q4AC94	2353 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	ZFHX3	Q15911	3703 aa		12.82	□□□□□ -0.36
PLOD3-208	ENST00000460132	LOC100653049	A0A140TA62	436 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132		M0R082	166 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132		M0R1B8	84 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	OVOL3	O00110	214 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	FXYD1	O00168	92 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	UPK3A	O75631	287 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	KRT33A	O76009	404 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	KRT34	O76011	436 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	C8B	P07358	591 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	INHBB	P09529	407 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	ZNF43	P17038	809 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	PTN	P21246	168 aa		12.81	□□□□□ -0.36
PLOD3-208	ENST00000460132	CBL	P22681	906 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms