RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 FUT4P22083 530 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 OPRM1P35372 400 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 RBM34P42696 430 aaKnown RBP13.93□□□□□ -0.18
SDF4-204ENST00000459994 IST1P53990 364 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 SELENBP1Q13228 472 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 RCN1Q15293 331 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 SF3B4Q15427 424 aaKnown RBP eCLIP13.93□□□□□ -0.18
SDF4-204ENST00000459994 ELOA3BQ3SY89 546 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 HMBOX1Q6NT76 420 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 VWA1Q6PCB0 445 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 AMIGO2Q86SJ2 522 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 NKAIN4Q8IVV8 208 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 ELOA3Q8NG57 546 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 OR4C15Q8NGM1 316 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 SLC7A13Q8TCU3 470 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 ACOT11Q8WXI4 607 aaPredicted RBP13.93□□□□□ -0.18
SDF4-204ENST00000459994 WNT2BQ93097 391 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 NRBF2Q96F24 287 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 TMEM43Q9BTV4 400 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 SLC19A3Q9BZV2 496 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 GALNT8Q9NY28 637 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 VNN3Q9NY84 501 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 C6orf203Q9P0P8 240 aaPredicted RBP13.93□□□□□ -0.18
SDF4-204ENST00000459994 STX18Q9P2W9 335 aaKnown RBP13.93□□□□□ -0.18
SDF4-204ENST00000459994 CHRNA9Q9UGM1 479 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 SAMHD1Q9Y3Z3 626 aaKnown RBP13.93□□□□□ -0.18
SDF4-204ENST00000459994 SPIN1Q9Y657 262 aaPredicted RBP13.93□□□□□ -0.18
SDF4-204ENST00000459994 TRBV4-1A0A0J9YWV2 114 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 A0A1W2PNV4 684 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 A0A1W2PPR1 153 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 HTR3EA5X5Y0 456 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 BAG2O95816 211 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 IL18BPO95998 194 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 FPR1P21462 350 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 GCKP35557 465 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 CLK1P49759 484 aaKnown RBP13.92□□□□□ -0.18
SDF4-204ENST00000459994 FGD3Q5JSP0 725 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 PODNL1Q6PEZ8 512 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 WDR88Q6ZMY6 472 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 CDC20BQ86Y33 519 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 RNF113BQ8IZP6 322 aaKnown RBP13.92□□□□□ -0.18
SDF4-204ENST00000459994 LINC00471Q8N535 108 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 OR52J3Q8NH60 311 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 RNF217Q8TC41 542 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 STK35Q8TDR2 534 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 SLC25A43Q8WUT9 341 aaPredicted RBP13.92□□□□□ -0.18
SDF4-204ENST00000459994 SMPDL3BQ92485 455 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 ALPK1Q96QP1 1244 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 TM9SF2Q99805 663 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 RBM24Q9BX46 236 aaKnown RBP13.92□□□□□ -0.18
SDF4-204ENST00000459994 CLEC4MQ9H2X3 399 aaPredicted RBP13.92□□□□□ -0.18
SDF4-204ENST00000459994 RNPEPL1Q9HAU8 725 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 TMCC3Q9ULS5 477 aa13.92□□□□□ -0.18
SDF4-204ENST00000459994 ABCA4P78363 2273 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 IGKV1D-42A0A075B6H8 117 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 A0A087WUU8 490 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 TMEM72A0PK05 275 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 SH3PXD2BA1X283 911 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 A8MVM7 634 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 NPIPB7O75200 414 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 IGF2P01344 180 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 OPN1LWP04000 364 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 PEPDP12955 493 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 ART1P52961 327 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 RAC1P63000 192 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 EXOC3L2Q2M3D2 409 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 C3orf33Q6P1S2 294 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 SHQ1Q6PI26 577 aaKnown RBP13.91□□□□□ -0.18
SDF4-204ENST00000459994 TTC33Q6PID6 262 aaPredicted RBP13.91□□□□□ -0.18
SDF4-204ENST00000459994 LSRQ86X29 649 aaPredicted RBP13.91□□□□□ -0.18
SDF4-204ENST00000459994 FAM222BQ8WU58 562 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 TMEM239Q8WW34 195 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 SFXN3Q9BWM7 321 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 POTEKPQ9BYX7 375 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 STOML1Q9UBI4 398 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 AP4B1Q9Y6B7 739 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 VPS13CQ709C8 3753 aa13.91□□□□□ -0.18
SDF4-204ENST00000459994 TUBAL3A6NHL2 446 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 E2F6O75461 281 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 IL11P20809 199 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 KIR2DL2P43627 348 aaPredicted RBP13.9□□□□□ -0.18
SDF4-204ENST00000459994 ARHGDIAP52565 204 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 EGR4Q05215 589 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 POU4F3Q15319 338 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 SEC23BQ15437 767 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 BCL2A1Q16548 175 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 MICAQ29983 383 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 SPNS3Q6ZMD2 512 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 ZNF730Q6ZMV8 503 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 MBOAT2Q6ZWT7 520 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 RRM2BQ7LG56 351 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 BTLAQ7Z6A9 289 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 TMEM179BQ7Z7N9 219 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 GGNQ86UU5 652 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 SVOPLQ8N434 492 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 OR5K1Q8NHB7 308 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 FNDC9Q8TBE3 224 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 TMEM255BQ8WV15 326 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 DDIT4LQ96D03 193 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms