RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 LIX1LQ8IVB5 337 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 C1orf162Q8NEQ5 155 aaPredicted RBP9.52□□□□□ -0.89
UBR4-208ENST00000459947 OR9K2Q8NGE7 335 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 ZNF226Q9NYT6 803 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 A1L4Q6 167 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 MGRN1O60291 552 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 KRT36O76013 467 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 FABP3P05413 133 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 GRPRP30550 384 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 KIR2DL3P43628 341 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 CRYBA2P53672 197 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 HOXC5Q00444 222 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 CHRNB3Q05901 458 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 TFAP2EQ6VUC0 442 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 AAED1Q7RTV5 226 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 PIWIL3Q7Z3Z3 882 aaKnown RBP9.52□□□□□ -0.89
UBR4-208ENST00000459947 NANOGNBQ7Z5D8 188 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 PTDSS2Q9BVG9 487 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 TAS2R1Q9NYW7 299 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 MAGED1Q9Y5V3 778 aaPredicted RBP9.52□□□□□ -0.89
UBR4-208ENST00000459947 NKX2-6A6NCS4 301 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 NPIPB13A6NJU9 1138 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 NPIPB4C9JG80 1138 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 LYPD3O95274 346 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 MT-ND1P03886 318 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 T-ENOLP0DO92 83 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
UBR4-208ENST00000459947 FOXF2Q12947 444 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 SLC17A1Q14916 467 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 DAZAP2Q15038 168 aaPredicted RBP9.52□□□□□ -0.89
UBR4-208ENST00000459947 CCDC121Q6ZUS5 278 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 TUSC5Q8IXB3 177 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 C17orf78Q8N4C9 275 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 FNDC8Q8TC99 324 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 ABHD3Q8WU67 409 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 SLC25A36Q96CQ1 311 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 ZNF300Q96RE9 604 aaPredicted RBP9.52□□□□□ -0.89
UBR4-208ENST00000459947 PIP5K1AQ99755 562 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 OBP2BQ9NPH6 170 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 NANSQ9NR45 359 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 GALNT8Q9NY28 637 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 EGFL7Q9UHF1 273 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 TMCC3Q9ULS5 477 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 FLVCR1Q9Y5Y0 555 aa9.52□□□□□ -0.89
UBR4-208ENST00000459947 IGKV1D-42A0A075B6H8 117 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 SLC43A1O75387 559 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 OR7A10O76100 309 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 NQO1P15559 274 aaKnown RBP9.51□□□□□ -0.89
UBR4-208ENST00000459947 RPS5P46782 204 aaKnown RBP9.51□□□□□ -0.89
UBR4-208ENST00000459947 OR7E24Q6IFN5 339 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 VWA1Q6PCB0 445 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 RINLQ6ZS11 566 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 Q6ZT83 130 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 PXKQ7Z7A4 578 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 FAM156AQ8NDB6 213 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 UPB1Q9UBR1 384 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 USP22Q9UPT9 525 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 A0A1W2PRQ8 180 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 ZC3H12DA2A288 527 aaKnown RBP9.51□□□□□ -0.89
UBR4-208ENST00000459947 IL32P24001 234 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 DGCR6Q14129 220 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 ZNF74Q16587 644 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 CASP12Q6UXS9 341 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 COMTD1Q86VU5 262 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 ZNF524Q96C55 264 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 UCK2Q9BZX2 261 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 TUBAL3A6NHL2 446 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 EBAG9O00559 213 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 CIB2O75838 187 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 AKR7A3O95154 331 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 EGR4Q05215 589 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 FBXW9Q5XUX1 488 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 ZNF730Q6ZMV8 503 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 TMEM99Q8N816 258 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 TAAR8Q969N4 342 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 KTI12Q96EK9 354 aaPredicted RBP9.51□□□□□ -0.89
UBR4-208ENST00000459947 AMBRA1Q9C0C7 1298 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 A4GNTQ9UNA3 340 aa9.51□□□□□ -0.89
UBR4-208ENST00000459947 M0R082 166 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 TPST2O60704 377 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 RNF224P0DH78 156 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 NCK1P16333 377 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 PUDPQ08623 228 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 CCDC36Q8IYA8 594 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 ZNF610Q8N9Z0 462 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 OR4D11Q8NGI4 311 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 ZNF417Q8TAU3 575 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 DHRS1Q96LJ7 313 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 ZNF587Q96SQ5 575 aaPredicted RBP9.5□□□□□ -0.89
UBR4-208ENST00000459947 THTPAQ9BU02 230 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 SLCO5A1Q9H2Y9 848 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 DAP3P51398 398 aaKnown RBP9.5□□□□□ -0.89
UBR4-208ENST00000459947 IL1RL1Q01638 556 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 PRKCDQ05655 676 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 MBOAT2Q6ZWT7 520 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 KISS1RQ969F8 398 aaPredicted RBP9.5□□□□□ -0.89
UBR4-208ENST00000459947 LRR1Q96L50 414 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 PRSS27Q9BQR3 290 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 OPN3Q9H1Y3 402 aaPredicted RBP9.5□□□□□ -0.89
UBR4-208ENST00000459947 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms