RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 ASPHQ12797 758 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 KLRB1Q12918 225 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 TMED1Q13445 227 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 ATP6AP1Q15904 470 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 DPYSL2Q16555 572 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 MICBQ29980 383 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 BOLA3Q53S33 107 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 OR52E8Q6IFG1 317 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 HSDL2Q6YN16 418 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 VSTM4Q8IW00 320 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 IQCF2Q8IXL9 164 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 FANK1Q8TC84 345 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 NDRG1Q92597 394 aaKnown RBP3.89□□□□□ -1.79
CKAP2-204ENST00000459902 EML4Q9HC35 981 aaKnown RBP3.89□□□□□ -1.79
CKAP2-204ENST00000459902 THUMPD1Q9NXG2 353 aaKnown RBP3.89□□□□□ -1.79
CKAP2-204ENST00000459902 SUN2Q9UH99 717 aa3.89□□□□□ -1.79
CKAP2-204ENST00000459902 MRPS7Q9Y2R9 242 aaKnown RBP3.89□□□□□ -1.79
CKAP2-204ENST00000459902 PHF3Q92576 2039 aaKnown RBP3.88□□□□□ -1.79
CKAP2-204ENST00000459902 SCN2AQ99250 2005 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 MTCL1Q9Y4B5 1905 aaKnown RBP3.88□□□□□ -1.79
CKAP2-204ENST00000459902 NSG1A0A0A6YYJ2 146 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 NKX2-6A6NCS4 301 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 LOC110117498-PIK3R3F6TDL0 507 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 MPHOSPH10O00566 681 aaKnown RBP3.88□□□□□ -1.79
CKAP2-204ENST00000459902 IGKV3-11P04433 115 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 CRISP2P16562 243 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
CKAP2-204ENST00000459902 QARSP47897 775 aaKnown RBP3.88□□□□□ -1.79
CKAP2-204ENST00000459902 ARRB1P49407 418 aaPredicted RBP3.88□□□□□ -1.79
CKAP2-204ENST00000459902 GPM6AP51674 278 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 OXA1LQ15070 435 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 DMRTC1Q5HYR2 192 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 MARCH8Q5T0T0 291 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 Q6ZN92 141 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 PAQR7Q86WK9 346 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 MARCH1Q8TCQ1 289 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 UBE2E3Q969T4 207 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 FCRL1Q96LA6 429 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 OXGR1Q96P68 337 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 CCDC94Q9BW85 323 aaPredicted RBP3.88□□□□□ -1.79
CKAP2-204ENST00000459902 RNF167Q9H6Y7 350 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 SEC14L3Q9UDX4 400 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 RAB26Q9ULW5 256 aa3.88□□□□□ -1.79
CKAP2-204ENST00000459902 ATP10AO60312 1499 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 A0A0G2JN53 185 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 TCRBV9S1A1TA0A576 114 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 CPLX1O14810 134 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 MAGEB3O15480 346 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 DIRAS1O95057 198 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 HSMCR30P0CW71 290 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 ZNF44P15621 663 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 GNA11P29992 359 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 FMO3P31513 532 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 BTCP35070 178 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 TNFRSF17Q02223 184 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 GPNMBQ14956 572 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 DUSP7Q16829 419 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 ZNF620Q6ZNG0 422 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 NLRP9Q7RTR0 991 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 TMEM61Q8N0U2 210 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 ZNF786Q8N393 782 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 OR52H1Q8NGJ2 320 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 N4BP2L2Q92802 583 aaPredicted RBP3.87□□□□□ -1.79
CKAP2-204ENST00000459902 ITCHQ96J02 903 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 ZSCAN5AQ9BUG6 496 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 ACTR6Q9GZN1 396 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 ROGDIQ9GZN7 287 aa3.87□□□□□ -1.79
CKAP2-204ENST00000459902 PTBP2Q9UKA9 531 aaKnown RBP3.87□□□□□ -1.79
CKAP2-204ENST00000459902 RPAP1Q9BWH6 1393 aaPredicted RBP3.87□□□□□ -1.79
CKAP2-204ENST00000459902 IGLV3-16A0A075B6K0 115 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 VGLL3A8MV65 326 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 POLR2DO15514 142 aaKnown RBP3.86□□□□□ -1.79
CKAP2-204ENST00000459902 PRKAB2O43741 272 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 GSSP48637 474 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 PPOXP50336 477 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 CCR6P51684 374 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 CCDC152Q4G0S7 254 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 SFT2D3Q587I9 215 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 GPR157Q5UAW9 335 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 NPBQ8NG41 125 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 OR51G1Q8NGK1 321 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 OR6X1Q8NH79 312 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 TMEM158Q8WZ71 300 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 UFD1Q92890 307 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 TM4SF19Q96DZ7 209 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 NHEJ1Q9H9Q4 299 aaPredicted RBP3.86□□□□□ -1.79
CKAP2-204ENST00000459902 CCL28Q9NRJ3 127 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 QPCTLQ9NXS2 382 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 CLCF1Q9UBD9 225 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 NUFIP1Q9UHK0 495 aaKnown RBP3.86□□□□□ -1.79
CKAP2-204ENST00000459902 ZNF223Q9UK11 482 aaPredicted RBP3.86□□□□□ -1.79
CKAP2-204ENST00000459902 ARID1AO14497 2285 aa3.86□□□□□ -1.79
CKAP2-204ENST00000459902 IGHV3-64DA0A0J9YX35 117 aa3.85□□□□□ -1.79
CKAP2-204ENST00000459902 RAMP3O60896 148 aa3.85□□□□□ -1.79
CKAP2-204ENST00000459902 SNNO75324 88 aaPredicted RBP3.85□□□□□ -1.79
CKAP2-204ENST00000459902 OXSR1O95747 527 aaPredicted RBP3.85□□□□□ -1.79
CKAP2-204ENST00000459902 POU2F1P14859 743 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms