RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 RFPL4AL1F8VTS6 287 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 H3BSH0 61 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 SPINT1O43278 529 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 SULT1B1O43704 296 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 ZFPL1O95159 310 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 LYPD3O95274 346 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 GP1BAP07359 652 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 MGMTP16455 207 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 SYN1P17600 705 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 BCL6P41182 706 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 FLT3LGP49771 235 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 EEF1A1P68104 462 aaKnown RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 KRT33BQ14525 404 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 HYAL4Q2M3T9 481 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 NDUFAF6Q330K2 333 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 SLC48A1Q6P1K1 146 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 LURAP1LQ8IV03 231 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 OR7G2Q8NG99 324 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 OR8S1Q8NH09 359 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 GRHL3Q8TE85 626 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 MS4A4EQ96PG1 132 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 MTHFD2LQ9H903 347 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-208ENST00000456385 PRDM7Q9NQW5 492 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 FBXO34Q9NWN3 711 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 HAO2Q9NYQ3 351 aa9.47□□□□□ -0.89
CLIP4-208ENST00000456385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.46□□□□□ -0.9
CLIP4-208ENST00000456385 OR6C68A6NDL8 312 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 PEX12O00623 359 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 APOC1P02654 83 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 SPP1P10451 314 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 ERGP11308 486 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 HIST1H1CP16403 213 aaKnown RBP9.46□□□□□ -0.9
CLIP4-208ENST00000456385 ADRA2CP18825 462 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 PVALBP20472 110 aaPredicted RBP9.46□□□□□ -0.9
CLIP4-208ENST00000456385 ARFIP1P53367 373 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 SLC7A9P82251 487 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 LRRC37A5PQ49AS3 106 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 LY6G6FQ5SQ64 297 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 MRPL2Q5T653 305 aaKnown RBP9.46□□□□□ -0.9
CLIP4-208ENST00000456385 RAB11FIP2Q7L804 512 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 OR2W3Q7Z3T1 314 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 RANBP3LQ86VV4 465 aaPredicted RBP9.46□□□□□ -0.9
CLIP4-208ENST00000456385 GLB1L2Q8IW92 636 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 SLC35F2Q8IXU6 374 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 OR1S2Q8NGQ3 325 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 OR5K2Q8NHB8 316 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 MIB2Q96AX9 1013 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 MS4A6EQ96DS6 147 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 MRGPRX3Q96LB0 322 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF681Q96N22 645 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 SLC46A2Q9BY10 475 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 KCNE5Q9UJ90 142 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 PCDHB10Q9UN67 800 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 UNC80Q8N2C7 3258 aa9.46□□□□□ -0.9
CLIP4-208ENST00000456385 C17orf113A0A1B0GUU1 675 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 TSPAN11A1L157 253 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 PRR32B1ATL7 298 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 CTNSO60931 367 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 CLEC3AO75596 197 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 SLC25A12O75746 678 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 RBBP9O75884 186 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 RAB40ALP0C0E4 278 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 UBBP0CG47 229 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 UBCP0CG48 685 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 MAPK3P27361 379 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 SOX2P48431 317 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ACTA2P62736 377 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 RPS27AP62979 156 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 UBA52P62987 128 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ACTG2P63267 376 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 S100A12P80511 92 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ATXN7L3Q14CW9 347 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DUSP5Q16690 384 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 MFSD12Q6NUT3 480 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 JMJD6Q6NYC1 403 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 TMPRSS11FQ6ZWK6 438 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 TMCO2Q7Z6W1 182 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 RAB40AQ8WXH6 277 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 MOAP1Q96BY2 351 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 NUS1Q96E22 293 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 LINC00615Q96LM1 132 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 CNN2Q99439 309 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 NCDNQ9UBB6 729 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ABT1Q9ULW3 272 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF337Q9Y3M9 751 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 A0A1B0GW55 424 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 TMEM218A2RU14 115 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 FAM171A2A8MVW0 826 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 GLSO94925 669 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 RPP14O95059 124 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 AKR7A3O95154 331 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 OR2T7P0C7T2 308 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DUX4L2P0CJ85 424 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DUX4L3P0CJ86 424 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DUX4L4P0CJ87 422 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DUX4L5P0CJ88 424 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DUX4L6P0CJ89 424 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms