RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ARL8AQ96BM9 186 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MOAP1Q96BY2 351 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DDIT4LQ96D03 193 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NEURL3Q96EH8 262 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KATNB1Q9BVA0 655 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RSPO3Q9BXY4 272 aaPredicted RBP5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OR51B6Q9H340 312 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PLK3Q9H4B4 646 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AKTIPQ9H8T0 292 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EXD2Q9NVH0 621 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TREM2Q9NZC2 230 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NOP53Q9NZM5 478 aaKnown RBP5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEFF2Q9UIK5 374 aaPredicted RBP5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CFAP73A6NFT4 308 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AGAP5A6NIR3 686 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 B9A039 149 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 E9PBE3 544 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RNASET2O00584 256 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ANKRD28O15084 1053 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DNPH1O43598 174 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SERPINI2O75830 405 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IGLV1-44P01699 117 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HPXP02790 462 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 BCHEP06276 602 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TACSTD2P09758 323 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ALDOCP09972 364 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SAGP10523 405 aaPredicted RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PNMTP11086 282 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ETFAP13804 333 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 B4GALT1P15291 398 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EGR1P18146 543 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RPS4Y1P22090 263 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RPS5P46782 204 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CLDN8P56748 225 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CLDN17P56750 224 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ARF1P84077 181 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GLO1Q04760 184 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EPS8Q12929 822 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RIN1Q13671 783 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MAPK11Q15759 364 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EFNB3Q15768 340 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CEACAM16Q2WEN9 425 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PHYHD1Q5SRE7 291 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AVPI1Q5T686 147 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ANKRD16Q6P6B7 361 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SHQ1Q6PI26 577 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 BHLHB9Q6PI77 547 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SERPINA11Q86U17 422 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LRP11Q86VZ4 500 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EPHX4Q8IUS5 362 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RFLNBQ8N5W9 214 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LINC01356Q8N9X3 169 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 POMGNT2Q8NAT1 580 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CLDND2Q8NHS1 167 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MIPOL1Q8TD10 442 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C22orf15Q8WYQ4 148 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 BCL2L2Q92843 193 aaPredicted RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 YIPF5Q969M3 257 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 VPS33AQ96AX1 596 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC25A36Q96CQ1 311 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PRPF18Q99633 342 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC6A7Q99884 636 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NAA11Q9BSU3 229 aaPredicted RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PTDSS2Q9BVG9 487 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C1QTNF5Q9BXJ0 243 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NUF2Q9BZD4 464 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MRPL37Q9BZE1 423 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DPY30Q9C005 99 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C20orf27Q9GZN8 174 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CRLF2Q9HC73 371 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EXOSC3Q9NQT5 275 aaKnown RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HIF1ANQ9NWT6 349 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MKS1Q9NXB0 559 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 B3GAT1Q9P2W7 334 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MID2Q9UJV3 735 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PCDHGB4Q9UN71 923 aa5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF443Q9Y2A4 671 aaPredicted RBP5.17□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ARPC4-TTLL3A0A0A6YYG9 625 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM129A0AVI4 362 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DUXAA6NLW8 204 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM229AB2RXF0 380 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 M0R082 166 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 M0R3G1 203 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DYNC1I1O14576 645 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF208O43345 1280 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CDC14BO60729 498 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EIF1BO60739 113 aaKnown RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SNUPNO95149 360 aaKnown RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HPRP00739 348 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AVPP01185 164 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IGKV3-15P01624 115 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GPIP06744 558 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 BPGMP07738 259 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 FGF4P08620 206 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PATE4P0C8F1 98 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NR2F1P10589 423 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NAT2P11245 290 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NCF2P19878 526 aaPredicted RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NPR2P20594 1047 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 UQCRC2P22695 453 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms