RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 AP3M1Q9Y2T2 418 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 WIF1Q9Y5W5 379 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 HIVEP3Q5T1R4 2406 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 KLRC4-KLRK1H3BQV0 150 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 PYCARD-AS1I3L0S3 204 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 FMO3P31513 532 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 ATP12AP54707 1039 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 RIPPLY1Q0D2K3 151 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 KLHL26Q53HC5 615 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 RPUSD3Q6P087 351 aaKnown RBP8.94□□□□□ -0.98
CCDC171-203ENST00000449575 CREB3L2Q70SY1 520 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 CCDC190Q86UF4 302 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 COMTD1Q86VU5 262 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 CALHM3Q86XJ0 350 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 VRK2Q86Y07 508 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF619Q8N2I2 560 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 OR8J3Q8NGG0 315 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 SECISBP2Q96T21 854 aaKnown RBP8.94□□□□□ -0.98
CCDC171-203ENST00000449575 CDADC1Q9BWV3 514 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 TBL1XR1Q9BZK7 514 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF556Q9HAH1 456 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 A4GALTQ9NPC4 353 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 RLIMQ9NVW2 624 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 B3GNT2Q9NY97 397 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 TNFRSF10DQ9UBN6 386 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 MRTO4Q9UKD2 239 aaKnown RBP8.94□□□□□ -0.98
CCDC171-203ENST00000449575 CHST2Q9Y4C5 530 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 KIAA1549Q9HCM3 1950 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 POLEQ07864 2286 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 ALG1L2C9J202 215 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 ADAM11O75078 769 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 PDE9AO76083 593 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 GLSO94925 669 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-203ENST00000449575 BPNT1O95861 308 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 AGR2O95994 175 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 PPIBP23284 216 aaKnown RBP8.94□□□□□ -0.98
CCDC171-203ENST00000449575 ARHGDIAP52565 204 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 CRYBA2P53672 197 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 CDK6Q00534 326 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 HSF1Q00613 529 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 SCARB2Q14108 478 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF324BQ6AW86 544 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-203ENST00000449575 TMEM81Q6P7N7 255 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 UTS2BQ765I0 119 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 TCTE3Q8IZS6 198 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 OR8H2Q8N162 312 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 TMEM251Q8N6I4 163 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 SLC30A2Q9BRI3 323 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 DEFB127Q9H1M4 99 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 NIPAL2Q9H841 368 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 LIPGQ9Y5X9 500 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 DSPPQ9NZW4 1301 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 MYO7BQ6PIF6 2116 aa8.94□□□□□ -0.98
CCDC171-203ENST00000449575 A0A0G2JMP0 313 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 CTDSP2O14595 271 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 AK1P00568 194 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 OPN1SWP03999 348 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 IGFBP5P24593 272 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 CRISP3P54108 245 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 PSPHP78330 225 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 PLGLB1Q02325 96 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF141Q15928 474 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 NXNL2Q5VZ03 156 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 FAM205BPQ63HN1 556 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 SLC30A6Q6NXT4 461 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 C16orf54Q6UWD8 224 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 PRICKLE2Q7Z3G6 844 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 NRARPQ7Z6K4 114 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 SIAH3Q8IW03 269 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 LRRC20Q8TCA0 184 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 PHOSPHO1Q8TCT1 267 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 UBQLN3Q9H347 655 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 TMEM38AQ9H6F2 299 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF703Q9H7S9 590 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-203ENST00000449575 ZFP64Q9NPA5 681 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 KLHL21Q9UJP4 597 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 LIPT1Q9Y234 373 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 GMPPBQ9Y5P6 360 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 A0A0B4J203 849 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 NPIPA5E9PKD4 350 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 SCDO00767 359 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 HPGDP15428 266 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 PPIAP62937 165 aaKnown RBP8.93□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF117Q03924 483 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCDC171-203ENST00000449575 FAPQ12884 760 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 SNTA1Q13424 505 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 TNK1Q13470 666 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 IGFBP7Q16270 282 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 FIP1L1Q6UN15 594 aaKnown RBP8.93□□□□□ -0.98
CCDC171-203ENST00000449575 KCTD20Q7Z5Y7 419 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 SERPINA11Q86U17 422 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 TSPYL5Q86VY4 417 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-203ENST00000449575 ARL6IP6Q8N6S5 226 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 OR1J4Q8NGS1 313 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 CPT1CQ8TCG5 803 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 TMEM41AQ96HV5 264 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 BARD1Q99728 777 aaKnown RBP8.93□□□□□ -0.98
CCDC171-203ENST00000449575 WFDC6Q9BQY6 131 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 SLC22A4Q9H015 551 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms