RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 EML2O95834 649 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 H2BFMP0C1H6 154 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 COX4I1P13073 169 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 PTNP21246 168 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 NAA10P41227 235 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 GPX6P59796 221 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 DAG1Q14118 895 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 RNPS1Q15287 305 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 Q5PR19 223 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 RPS27LQ71UM5 84 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 MARCH3Q86UD3 253 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF547Q8IVP9 402 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 IQCF2Q8IXL9 164 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR5AS1Q8N127 324 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 MARVELD2Q8N4S9 558 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 CDS1Q92903 461 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 RCN3Q96D15 328 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZFP3Q96NJ6 502 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF649Q9BS31 505 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 MMP25Q9NPA2 562 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 FBXO34Q9NWN3 711 aa5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 TUBA8Q9NY65 449 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-209ENST00000448940 E7ESA3 106 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 KRT36O76013 467 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 STOMP27105 288 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PTGER1P34995 402 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 MAGEA5P43359 124 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 C3AR1Q16581 482 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CLEC12BQ2HXU8 276 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PDZK1Q5T2W1 519 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 FBXO42Q6P3S6 717 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ANKRD16Q6P6B7 361 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 FCRLAQ7L513 359 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SYT14Q8NB59 555 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 AKAP1Q92667 903 aaKnown RBP eCLIP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CNBD2Q96M20 576 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 POLR2J3Q9H1A7 115 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SSU72Q9NP77 194 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CLN6Q9NWW5 311 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 FZR1Q9UM11 496 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 RRP15Q9Y3B9 282 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 A0A0G2JMZ2 1700 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 F2RL2O00254 374 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 LAMP1P11279 417 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PLA2G2AP14555 144 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 IST1P53990 364 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CTXN1P60606 82 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 RPS16P62249 146 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC34A1Q06495 639 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 BAMBIQ13145 260 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 DHRS7BQ6IAN0 325 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEM139Q8IV31 216 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SFTPA2Q8IWL1 248 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR10X1Q8NGY0 326 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ABHD4Q8TB40 342 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 NT5CQ8TCD5 201 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 RNFT2Q96EX2 444 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 FAM46AQ96IP4 442 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF582Q96NG8 517 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF285Q96NJ3 590 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 BIRC8Q96P09 236 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 WWTR1Q9GZV5 400 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PTTG2Q9NZH5 202 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 MED12Q93074 2177 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PDE5AO76074 875 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ITGAMP11215 1152 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PTAFRP25105 342 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 NFYBP25208 207 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TGM4P49221 684 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 NSUN5P1Q3KNT7 163 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CCNJQ5T5M9 372 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SHEQ5VZ18 495 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 LACC1Q8IV20 430 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 AURKBQ96GD4 344 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SNX18Q96RF0 628 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CGREF1Q99674 301 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 MS4A5Q9H3V2 200 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SAV1Q9H4B6 383 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CXorf21Q9HAI6 301 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 BCO1Q9HAY6 547 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ARMCX1Q9P291 453 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TESMINQ9Y4I5 508 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 AHRRA9YTQ3 701 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 EEDO75530 441 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 EFEMP2O95967 443 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CST1P01037 141 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 RAC2P15153 192 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SRD5A2P31213 254 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 HTR6P50406 440 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 LIPEQ05469 1076 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 QPRTQ15274 297 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ESPNLQ6ZVH7 1005 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CROCCP3Q8IVE0 287 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR51A7Q8NH64 312 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 GPA33Q99795 319 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 NUDT9Q9BW91 350 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 WDR12Q9GZL7 423 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 FBXL3Q9UKT7 428 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 NUP214P35658 2090 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms