RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RAB26Q9ULW5 256 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 HIF3AQ9Y2N7 669 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 H0YAE9 185 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 H0YC42 278 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 M0R082 166 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 ERVH48-1M5A8F1 160 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 OR6A2O95222 327 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 CAPGP40121 348 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 SUCLG1P53597 346 aaKnown RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 TPD52P55327 224 aaPredicted RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 PRPS1P60891 318 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 RPS4XP62701 263 aaKnown RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 FHL1Q13642 323 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 PTGES3Q15185 160 aaKnown RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 CLEC12AQ5QGZ9 265 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 HBMQ6B0K9 141 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 VASNQ6EMK4 673 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 Q6ZPB1 254 aaPredicted RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 SCAIQ8N9R8 606 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 ZNF417Q8TAU3 575 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 TFAP2CQ92754 450 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 ZNF587Q96SQ5 575 aaPredicted RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 MRPL39Q9NYK5 338 aaKnown RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 LOC100130705A0A1B0GUX0 176 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 SLC16A6O15403 523 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 AKR7A3O95154 331 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 NDUFB2O95178 105 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 ZNF708P17019 499 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 EIF1AXP47813 144 aaKnown RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 CLDN18P56856 261 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 CARD18P57730 90 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 FXYD6P3P58550 94 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 ADARB1P78563 741 aaKnown RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 SRYQ05066 204 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 BCL2A1Q16548 175 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 SGCBQ16585 318 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 CTU2Q2VPK5 515 aaKnown RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 PDSS1Q5T2R2 415 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 H1FNTQ75WM6 255 aaPredicted RBP17.53■□□□□ 0.4
SGCE-207ENST00000447873 MEIOBQ8N635 442 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 OR8D4Q8NGM9 314 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 OR2V1Q8NHB1 315 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 ADGRG7Q96K78 797 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 TSSK6Q9BXA6 273 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 NDEL1Q9GZM8 345 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 SPRR3Q9UBC9 169 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 SEC14L4Q9UDX3 406 aa17.53■□□□□ 0.4
SGCE-207ENST00000447873 BCKDKO14874 412 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 ADORA3P0DMS8 318 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 AQP2P41181 271 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 GIPRP48546 466 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 RPL18Q07020 188 aaKnown RBP17.52■□□□□ 0.39
SGCE-207ENST00000447873 KLRB1Q12918 225 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 GINS1Q14691 196 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 TMEM236Q5W0B7 351 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 SLC27A4Q6P1M0 643 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 THSD4Q6ZMP0 1018 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 OR10D3Q8NH80 312 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 HRASLS5Q96KN8 279 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 TIMP4Q99727 224 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 Q9H521 79 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 CHST11Q9NPF2 352 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 TIGARQ9NQ88 270 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 TAS2R5Q9NYW4 299 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 TNFRSF10DQ9UBN6 386 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 B3GALT5Q9Y2C3 310 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 GMPPBQ9Y5P6 360 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 KIAA1549Q9HCM3 1950 aa17.52■□□□□ 0.39
SGCE-207ENST00000447873 A0A1B0GVC2 190 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 ZAR1LA6NP61 321 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 AQP7O14520 342 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 EIF1BO60739 113 aaKnown RBP17.51■□□□□ 0.39
SGCE-207ENST00000447873 FZD7O75084 574 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 AHCYP23526 432 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 SLC6A6P31641 620 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 UQCRC1P31930 480 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 RPL4P36578 427 aaKnown RBP17.51■□□□□ 0.39
SGCE-207ENST00000447873 CLDN15P56746 228 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 RAC3P60763 192 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 RPS3AP61247 264 aaKnown RBP17.51■□□□□ 0.39
SGCE-207ENST00000447873 ST3GAL2Q16842 350 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 ALG10Q5BKT4 473 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 SLC43A2Q8N370 569 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 CISD2Q8N5K1 135 aaKnown RBP17.51■□□□□ 0.39
SGCE-207ENST00000447873 OR2T33Q8NG76 320 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 MOSPD2Q8NHP6 518 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 ZHX1-C8orf76Q96EF9 292 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 IFT27Q9BW83 186 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 ENKD1Q9H0I2 346 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 PLSCR2Q9NRY7 297 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 LRRC42Q9Y546 428 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 USP24Q9UPU5 2620 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 BSNQ9UPA5 3926 aa17.51■□□□□ 0.39
SGCE-207ENST00000447873 NBEAQ8NFP9 2946 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 PLPP3O14495 311 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 RNF13O43567 381 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 DNPH1O43598 174 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 WISP2O76076 250 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 CLIC3O95833 236 aa17.5■□□□□ 0.39
SGCE-207ENST00000447873 TSPAN19P0C672 248 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms