RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 RASGEF1AQ8N9B8 481 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 SDR9C7Q8NEX9 313 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 OR4Q3Q8NH05 313 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 ZNF75AQ96N20 296 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 BNIP3LO60238 219 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 PMS2P2O95744 297 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 LRG1P02750 347 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 CD2P06729 351 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 C1GALT1C1LP0DN25 315 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 PRG2P13727 222 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 CNTN1Q12860 1018 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 TDGQ13569 410 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 ALKBH1Q13686 389 aaKnown RBP17.67■□□□□ 0.42
HMGA1-205ENST00000447654 HMGN3Q15651 99 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 NDUFAF6Q330K2 333 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 C11orf87Q6NUJ2 197 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 TMPRSS11FQ6ZWK6 438 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 MEPCEQ7L2J0 689 aaKnown RBP17.67■□□□□ 0.42
HMGA1-205ENST00000447654 NDUFAF7Q7L592 441 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 SLC29A4Q7RTT9 530 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 DMRTC2Q8IXT2 367 aaPredicted RBP17.67■□□□□ 0.42
HMGA1-205ENST00000447654 NXPE1Q8N323 547 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 LNX2Q8N448 690 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 FIBINQ8TAL6 211 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 ADAM19Q9H013 955 aa17.67■□□□□ 0.42
HMGA1-205ENST00000447654 TSPAN10Q9H1Z9 355 aaPredicted RBP17.67■□□□□ 0.42
HMGA1-205ENST00000447654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.67■□□□□ 0.427e-16■■□□□ 11.5
HMGA1-205ENST00000447654 LSM7Q9UK45 103 aaKnown RBP17.67■□□□□ 0.42
HMGA1-205ENST00000447654 A0A087WUU8 490 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 NPIPB15A6NHN6 443 aaPredicted RBP17.66■□□□□ 0.42
HMGA1-205ENST00000447654 OIP5O43482 229 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 CBFBQ13951 182 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 TOMM20Q15388 145 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 LRRC73Q5JTD7 316 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 TMEM25Q86YD3 366 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 KREMEN2Q8NCW0 462 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 OR4A4PQ8NGN8 299 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 ORAI3Q9BRQ5 295 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 TMEM27Q9HBJ8 222 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 MYOZ1Q9NP98 299 aaPredicted RBP17.66■□□□□ 0.42
HMGA1-205ENST00000447654 FOXJ3Q9UPW0 622 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 OR5H14A6NHG9 310 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 TBXA2RP21731 343 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 PDHA2P29803 388 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 DCTDP32321 178 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 AHRP35869 848 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 TEAD2Q15562 447 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 SPRED2Q7Z698 418 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 THOC6Q86W42 341 aaKnown RBP17.66■□□□□ 0.42
HMGA1-205ENST00000447654 C1QL4Q86Z23 238 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 CBARPQ8N350 705 aaPredicted RBP17.66■□□□□ 0.42
HMGA1-205ENST00000447654 PIGXQ8TBF5 258 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 C16orf78Q8WTQ4 265 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 PPP1R16AQ96I34 528 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 APMAPQ9HDC9 416 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 NRIP3Q9NQ35 241 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 COMMD9Q9P000 198 aa17.66■□□□□ 0.42
HMGA1-205ENST00000447654 CXXC1Q9P0U4 656 aaPredicted RBP17.66■□□□□ 0.42
HMGA1-205ENST00000447654 A0A1W2PPE3 182 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 F12P00748 615 aaPredicted RBP17.65■□□□□ 0.42
HMGA1-205ENST00000447654 CSF1P09603 554 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 ANXA11P50995 505 aaKnown RBP17.65■□□□□ 0.42
HMGA1-205ENST00000447654 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.65■□□□□ 0.42
HMGA1-205ENST00000447654 BBS1Q8NFJ9 593 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 OR2T33Q8NG76 320 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 OR10H5Q8NGA6 315 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 HMGB4Q8WW32 186 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 SLC25A38Q96DW6 304 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 LINC00597Q9H2U6 94 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 CXorf36Q9H7Y0 433 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 HINT3Q9NQE9 182 aaKnown RBP17.65■□□□□ 0.42
HMGA1-205ENST00000447654 MBD1Q9UIS9 605 aaPredicted RBP17.65■□□□□ 0.42
HMGA1-205ENST00000447654 HCFC2Q9Y5Z7 792 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 TRANK1O15050 2925 aa17.65■□□□□ 0.42
HMGA1-205ENST00000447654 A0A1B0GTI1 187 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 F8VVB4 439 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 F8VWA3 439 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 FOXE1O00358 373 aaPredicted RBP17.64■□□□□ 0.42
HMGA1-205ENST00000447654 SOCS6O14544 535 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 EMC8O43402 210 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 DPP4P27487 766 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 PPM1AP35813 382 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 GLP1RP43220 463 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 LY6G6FQ5SQ64 297 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 TMEM69Q5SWH9 247 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 NIPAL3Q6P499 406 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 ENPP7Q6UWV6 458 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 BOLLQ8N9W6 283 aaKnown RBP17.64■□□□□ 0.42
HMGA1-205ENST00000447654 SLC30A7Q8NEW0 376 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 OR5P2Q8WZ92 322 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 TRMT61BQ9BVS5 477 aaKnown RBP17.64■□□□□ 0.42
HMGA1-205ENST00000447654 TMEM121BQ9BXQ6 578 aaPredicted RBP17.64■□□□□ 0.42
HMGA1-205ENST00000447654 CHMP1AQ9HD42 196 aaPredicted RBP17.64■□□□□ 0.42
HMGA1-205ENST00000447654 C2orf42Q9NWW7 574 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 UPB1Q9UBR1 384 aa17.64■□□□□ 0.42
HMGA1-205ENST00000447654 ADH1CP00326 375 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 RLN1P04808 185 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 ANXA2P07355 339 aaKnown RBP17.64■□□□□ 0.41
HMGA1-205ENST00000447654 CALCBP10092 127 aa17.64■□□□□ 0.41
HMGA1-205ENST00000447654 TPT1P13693 172 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms