RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CXorf58Q96LI9 332 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 MS4A4EQ96PG1 132 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 GAR1Q9NY12 217 aaKnown RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 B4GALT6Q9UBX8 382 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 CSAG2Q9Y5P2 127 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 TGOLN2O43493 480 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 GJB3O75712 270 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 FUT1P19526 365 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 SLC2A5P22732 501 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 SSBP1Q04837 148 aaKnown RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 COTL1Q14019 142 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 TRAPPC6BQ86SZ2 158 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 CACUL1Q86Y37 369 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 LRRC25Q8N386 305 aaPredicted RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 INTS14Q96SY0 518 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 RAB22AQ9UL26 194 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ABT1Q9ULW3 272 aaKnown RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 FGF9P31371 208 aaPredicted RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 CD80P33681 288 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 OR1Q1Q15612 314 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 IL17FQ96PD4 163 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ARHGAP9Q9BRR9 750 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 GABARAPH6UMI1 98 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 SCAF4O95104 1147 aaKnown RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 HAAOP46952 286 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 C6orf132Q5T0Z8 1188 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 TMEM99Q8N816 258 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 PDCD1LG2Q9BQ51 273 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 DPH1Q9BZG8 443 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 BHLHE40O14503 412 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ALKAL1Q6UXT8 129 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 TINAGL1Q9GZM7 467 aaPredicted RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 ZNF638Q14966 1978 aaKnown RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 A0A087X0M5 115 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 TRAV1-2A0A0B4J238 106 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 A0A1B0GX30 115 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 FEZF1A0PJY2 475 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 PHOX2AO14813 284 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 TEAD1P28347 426 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 CDK3Q00526 305 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 DCAF4L2Q8NA75 395 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 AVL9Q8NBF6 648 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 CPN1P15169 458 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 URGCP-MRPS24S4R325 110 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ARGFXA6NJG6 315 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 TAAR5O14804 337 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 SLC25A35Q3KQZ1 300 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 USP36Q9P275 1121 aaKnown RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 ATG2BQ96BY7 2078 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 SLC33A1O00400 549 aaPredicted RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 PYCR3Q53H96 274 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ACSM5Q6NUN0 579 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 SAMD10Q9BYL1 202 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ACTL8Q9H568 366 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 IL21RQ9HBE5 538 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 C1QTNF3-AMACRE9PGA6 284 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 AQP8O94778 261 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 H3F3AP84243 136 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 YOD1Q5VVQ6 348 aaPredicted RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 NAXDQ8IW45 347 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 URM1Q9BTM9 101 aaKnown RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 PARP12Q9H0J9 701 aaKnown RBP7.32□□□□□ -1.24
SMG1-202ENST00000446231 TRPM6Q9BX84 2022 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 SEC14L6B5MCN3 397 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 M0R143 59 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 HOXB5P09067 269 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 FURINP09958 794 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 IER2Q9BTL4 223 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 BCO1Q9HAY6 547 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 GTF3C1Q12789 2109 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ZBTB42B2RXF5 422 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 PYCARD-AS1I3L0S3 204 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 PABPC1L2AQ5JQF8 200 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 CPED1A4D0V7 1026 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 LAMTOR1Q6IAA8 161 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 OR5M10Q6IEU7 315 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 ANKRD19PQ9H560 264 aa7.32□□□□□ -1.24
SMG1-202ENST00000446231 OR2T1O43869 369 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 C22orf39Q6P5X5 142 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 ZNF600Q6ZNG1 722 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 GPR142Q7Z601 462 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 RNF113BQ8IZP6 322 aaKnown RBP7.31□□□□□ -1.24
SMG1-202ENST00000446231 COMMD1Q8N668 190 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 OR5M8Q8NGP6 311 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 GAL3ST4Q96RP7 486 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 NTMQ9P121 344 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 ZNF840PA6NDX5 716 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 FAM183AA6NL82 134 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 FAM213BQ8TBF2 198 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 CMTM3Q96MX0 182 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 BARHL1Q9BZE3 327 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 GHRLQ9UBU3 117 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 CLEC4EQ9ULY5 219 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 MMP11P24347 488 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 TXNDC8Q6A555 127 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 STEAP1BQ6NZ63 245 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 OR2AK2Q8NG84 335 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 OR4C15Q8NGM1 316 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 SLC41A2Q96JW4 573 aa7.31□□□□□ -1.24
SMG1-202ENST00000446231 TMPRSS13Q9BYE2 586 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms