RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 PATL1Q86TB9 770 aaKnown RBP12.99□□□□□ -0.33
USE1-202ENST00000445667 RANBP3LQ86VV4 465 aaPredicted RBP12.99□□□□□ -0.33
USE1-202ENST00000445667 CALHM3Q86XJ0 350 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 RBM45Q8IUH3 476 aaKnown RBP12.99□□□□□ -0.33
USE1-202ENST00000445667 EPHX4Q8IUS5 362 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 SLC30A8Q8IWU4 369 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 POU5F2Q8N7G0 328 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 OR4D11Q8NGI4 311 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 OR52N5Q8NH56 324 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 LILRB1Q8NHL6 650 aaPredicted RBP12.99□□□□□ -0.33
USE1-202ENST00000445667 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
USE1-202ENST00000445667 SLC26A7Q8TE54 656 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
USE1-202ENST00000445667 NEUROG1Q92886 237 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 PIGTQ969N2 578 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 TAMM41Q96BW9 452 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 CCL19Q99731 98 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 SH3GL1Q99961 368 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 ESRP2Q9H6T0 727 aaKnown RBP12.99□□□□□ -0.33
USE1-202ENST00000445667 TAS2R16Q9NYV7 291 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 SELENONQ9NZV5 590 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 RASD1Q9Y272 281 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 CAPN7Q9Y6W3 813 aa12.99□□□□□ -0.33
USE1-202ENST00000445667 TRAV36DV7A0A075B6V5 113 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 PDLIM1O00151 329 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 HS3ST1O14792 307 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 VAMP5O95183 116 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 NPPAP01160 153 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 C8BP07358 591 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 CD3EP07766 207 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 CD99P14209 185 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 GTF2E2P29084 291 aaKnown RBP12.98□□□□□ -0.33
USE1-202ENST00000445667 GRPRP30550 384 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 NKX6-1P78426 367 aaPredicted RBP12.98□□□□□ -0.33
USE1-202ENST00000445667 LTBQ06643 244 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 BSPH1Q075Z2 132 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 LGALS3BPQ08380 585 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 NPTX1Q15818 432 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 GABRA6Q16445 453 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 FAM69AQ5T7M9 428 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 INTS11Q5TA45 600 aaKnown RBP12.98□□□□□ -0.33
USE1-202ENST00000445667 C20orf204Q6ZNR8 217 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 P2RY8Q86VZ1 359 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 WFDC11Q8NEX6 87 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 OR8J3Q8NGG0 315 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 OR6T1Q8NGN1 323 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 ZNF583Q96ND8 569 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 MUS81Q96NY9 551 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 SLCO5A1Q9H2Y9 848 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 GID8Q9NWU2 228 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 NPAP1Q9NZP6 1156 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 RNF115Q9Y4L5 304 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 F8P00451 2351 aa12.98□□□□□ -0.33
USE1-202ENST00000445667 CPSF4LA6NMK7 179 aaKnown RBP12.97□□□□□ -0.33
USE1-202ENST00000445667 M0R082 166 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 OR2T1O43869 369 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 SMPD2O60906 423 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 CDH2P19022 906 aaPredicted RBP12.97□□□□□ -0.33
USE1-202ENST00000445667 HOXC12P31275 282 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 SELENOPP49908 381 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 CRYBA2P53672 197 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 FOXD4Q12950 439 aaPredicted RBP12.97□□□□□ -0.33
USE1-202ENST00000445667 ENTPD8Q5MY95 495 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 OR7E24Q6IFN5 339 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 NIPAL3Q6P499 406 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 C5orf46Q6UWT4 87 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 H1FNTQ75WM6 255 aaPredicted RBP12.97□□□□□ -0.33
USE1-202ENST00000445667 CCDC80Q76M96 950 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 WDR31Q8NA23 367 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 KBTBD8Q8NFY9 601 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 ZNF417Q8TAU3 575 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 RCN3Q96D15 328 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 OXGR1Q96P68 337 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 ZNF587Q96SQ5 575 aaPredicted RBP12.97□□□□□ -0.33
USE1-202ENST00000445667 PIP5K1AQ99755 562 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 C1QTNF6Q9BXI9 259 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 EVA1AQ9H8M9 152 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 SLC25A15Q9Y619 301 aa12.97□□□□□ -0.33
USE1-202ENST00000445667 LRRN3E7EW58 273 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 MS4A18H0YCH9 400 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 AIM2O14862 343 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 FMO6PO60774 539 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 FZD7O75084 574 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 KRT33AO76009 404 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 BGLAPP02818 100 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 THY1P04216 161 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 ZNF43P17038 809 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 MPGP29372 298 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 ZNF83P51522 516 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 SEC24CP53992 1094 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 CLDN17P56750 224 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 IL1RL1Q01638 556 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 MS4A18Q3C1V0 323 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 ADAM5Q6NVV9 412 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 ZNF613Q6PF04 617 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 TSPYL5Q86VY4 417 aaPredicted RBP12.96□□□□□ -0.33
USE1-202ENST00000445667 KRTAP1-3Q8IUG1 177 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 ZNF611Q8N823 705 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms