RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 RGS9O75916 674 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-208ENST00000443046 KRT33AO76009 404 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 VAMP5O95183 116 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 AVPP01185 164 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 TFP02787 698 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 COL8A2P25067 703 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 EVX1P49640 407 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 SH3BGRP55822 239 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-208ENST00000443046 CLDN8P56748 225 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 LMO4P61968 165 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 IL1RL1Q01638 556 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 MSMPQ1L6U9 139 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 SLC9B1Q4ZJI4 515 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 HMGN2P46Q86SG4 172 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 GPAT4Q86UL3 456 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 EPHX4Q8IUS5 362 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 RAB8BQ92930 207 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 LRRC37BQ96QE4 947 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 ZNF747Q9BV97 191 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 DYNLRB1Q9NP97 96 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 USP22Q9UPT9 525 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 WNK2Q9Y3S1 2297 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 AGAP5A6NIR3 686 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 NPHS1O60500 1241 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 ZNF432O94892 652 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 GAAP10253 952 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 G6PDP11413 515 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 EPHA1P21709 976 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 EPS8Q12929 822 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 OR7A5Q15622 319 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 WHAMMP3Q1A5X7 153 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 ATAD3BQ5T9A4 648 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 SAXO2Q658L1 398 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 OR4F3Q6IEY1 312 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 TNFAIP8L2Q6P589 184 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-208ENST00000443046 C17orf53Q8N3J3 647 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-208ENST00000443046 CCDC63Q8NA47 563 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 FNDC5Q8NAU1 212 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 IL17RDQ8NFM7 739 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 JMJD8Q96S16 334 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 G6PC2Q9NQR9 355 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 PRDM4Q9UKN5 801 aa12.39□□□□□ -0.43
HMGN1-208ENST00000443046 NOTCH1P46531 2555 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 SYNGR3O43761 229 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 NPIPB7O75200 414 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 SKAP2O75563 359 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 PNPP00491 289 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 HPXP02790 462 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 SAGP10523 405 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 RPS4Y1P22090 263 aaKnown RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 ACHEP22303 614 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 UQCRC2P22695 453 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 NR4A1P22736 598 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 ARR3P36575 388 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 GPR6P46095 362 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 TMEM33P57088 247 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 GSTA3Q16772 222 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 PGS1Q32NB8 556 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 TMEM225Q6GV28 225 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 SHQ1Q6PI26 577 aaKnown RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 THSD4Q6ZMP0 1018 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 OR8J2Q8NGG1 315 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 OR51F2Q8NH61 342 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 MRPL24Q96A35 216 aaKnown RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 NEURL3Q96EH8 262 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 MRPL37Q9BZE1 423 aaKnown RBP12.38□□□□□ -0.43
HMGN1-208ENST00000443046 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 ESM1Q9NQ30 184 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 REV1Q9UBZ9 1251 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 CMAHPQ9Y471 501 aa12.38□□□□□ -0.43
HMGN1-208ENST00000443046 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 CFAP73A6NFT4 308 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 HMGN4O00479 90 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 COPEO14579 308 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 ARRB2P32121 409 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 MRPS11P82912 194 aaKnown RBP12.37□□□□□ -0.43
HMGN1-208ENST00000443046 SNTB2Q13425 540 aaKnown RBP12.37□□□□□ -0.43
HMGN1-208ENST00000443046 DAG1Q14118 895 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 FAHD2BQ6P2I3 314 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-208ENST00000443046 NIPAL3Q6P499 406 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 TEX29Q8N6K0 151 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 ZDHHC22Q8N966 263 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 RDH5Q92781 318 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 YIPF5Q969M3 257 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 FAHD2AQ96GK7 314 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 TRNT1Q96Q11 434 aaKnown RBP12.37□□□□□ -0.43
HMGN1-208ENST00000443046 SLC38A1Q9H2H9 487 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 MS4A5Q9H3V2 200 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 B3GNT2Q9NY97 397 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 MID2Q9UJV3 735 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 RASD1Q9Y272 281 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 PCDHGB1Q9Y5G3 927 aa12.37□□□□□ -0.43
HMGN1-208ENST00000443046 LOC105371242A0A075B767 164 aa12.36□□□□□ -0.43
HMGN1-208ENST00000443046 A8MVM7 634 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms