RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 HIST3H2AQ7L7L0 130 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 ADGRE4PQ86SQ3 457 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 CCDC103Q8IW40 242 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 GCNT2Q8N0V5 402 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 PQLC1Q8N2U9 271 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 ATG16L2Q8NAA4 619 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 OR5J2Q8NH18 312 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 OR6S1Q8NH40 331 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 GNPDA2Q8TDQ7 276 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 RNF128Q8TEB7 428 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 GIPC3Q8TF64 312 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 ABHD3Q8WU67 409 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 HIST1H2ACQ93077 130 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 GTPBP3Q969Y2 492 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 SDCCAG3Q96C92 435 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 OAZ3Q9UMX2 235 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 RRP15Q9Y3B9 282 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 CORINQ9Y5Q5 1042 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 ZFYVE26Q68DK2 2539 aa12.12□□□□□ -0.47
TM9SF4-204ENST00000442842 CD8B2A6NJW9 211 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 AQP7P3A6NL99 342 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 C11orf98E9PRG8 122 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 BLOC1S5-TXNDC5H3BN57 136 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 CDC42EP2O14613 210 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 CYTIPO60759 359 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 IGF2P01344 180 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 STSP08842 583 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 ASAH2BP0C7U1 165 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 ADORA3P0DMS8 318 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 GLI4P10075 376 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 AHCYP23526 432 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 HMGA2P52926 109 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 SIRPAP78324 504 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 GK3PQ14409 553 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 SHQ1Q6PI26 577 aaKnown RBP12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 H1FNTQ75WM6 255 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 ZER1Q7Z7L7 766 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 OAFQ86UD1 273 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 KDM8Q8N371 416 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 MARVELD2Q8N4S9 558 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 LINC00471Q8N535 108 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 SCAIQ8N9R8 606 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 OR51A7Q8NH64 312 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 OR5K1Q8NHB7 308 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 CENPNQ96H22 339 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 GPA33Q99795 319 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 TTYH2Q9BSA4 534 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 CALHM2Q9HA72 323 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 MRPL39Q9NYK5 338 aaKnown RBP12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 MAGED1Q9Y5V3 778 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-204ENST00000442842 CNTRLQ7Z7A1 2325 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 UNC119BA6NIH7 251 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 G3V2T6 193 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 LRRTM2O43300 516 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 RNF13O43567 381 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 GASTP01350 101 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 HOXD4P09016 255 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 ANPEPP15144 967 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 PRKACGP22612 351 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 FPR3P25089 353 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 AQP2P41181 271 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 AGFG1P52594 562 aaKnown RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 PUDPQ08623 228 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 PMPCAQ10713 525 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 EEF1A1P5Q5VTE0 462 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 TMEM225Q6GV28 225 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 TMPRSS11FQ6ZWK6 438 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 STK32CQ86UX6 486 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 IGFN1Q86VF2 1251 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 HIPK1Q86Z02 1210 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 CNEP1R1Q8N9A8 125 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 MOSPD2Q8NHP6 518 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 FANK1Q8TC84 345 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 WNT2BQ93097 391 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 FEVQ99581 238 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 TM9SF2Q99805 663 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 NIPSNAP1Q9BPW8 284 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 PSD2Q9BQI7 771 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 RNF122Q9H9V4 155 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 KLHL9Q9P2J3 617 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 MGAT4BQ9UQ53 548 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 CFAP46Q8IYW2 2715 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 PCNX3Q9H6A9 2034 aa12.1□□□□□ -0.47
TM9SF4-204ENST00000442842 A0A1W2PNV4 684 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 HTR3EA5X5Y0 456 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 ARRDC5A6NEK1 342 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 E9PLN8 166 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 PDLIM1O00151 329 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 PLPP3O14495 311 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 FZD7O75084 574 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms