RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CIARTQ8N365 385 aaPredicted RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 ELOA3Q8NG57 546 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 OR4F15Q8NGB8 312 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 OR9K2Q8NGE7 335 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 MGARPQ8TDB4 240 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 LRRC8CQ8TDW0 803 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 ZG16BQ96DA0 208 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 MAELQ96JY0 434 aaKnown RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 ZNF607Q96SK3 696 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 CCDC28BQ9BUN5 200 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 LINC00470Q9BZP3 86 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 AMBRA1Q9C0C7 1298 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 C20orf27Q9GZN8 174 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 TMEM27Q9HBJ8 222 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 B3GAT2Q9NPZ5 323 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SDR39U1Q9NRG7 319 aaPredicted RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 MRGBPQ9NV56 204 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 ZNF443Q9Y2A4 671 aaPredicted RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 FLVCR1Q9Y5Y0 555 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 ZNF469Q96JG9 3925 aaPredicted RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 H7C417 338 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 NDUFS8O00217 210 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 CLIC1O00299 241 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 AP3D1O14617 1153 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 AIM2O14862 343 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SSX4O60224 188 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SLC43A1O75387 559 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 BCHEP06276 602 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 ZNF43P17038 809 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 CDKN1AP38936 164 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 MRPL19P49406 292 aaKnown RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 PDLIM4P50479 330 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 EFNA4P52798 201 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 MAGOHP61326 146 aaKnown RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 NCALDP61601 193 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SNRPD2P62316 118 aaKnown RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 FUT5Q11128 374 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 PGGHGQ32M88 737 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 AGBL2Q5U5Z8 902 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 C1orf140Q5VVS0 124 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 CYB5R2Q6BCY4 276 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 GPAT4Q86UL3 456 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 OR6S1Q8NH40 331 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SLC38A5Q8WUX1 472 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SLC38A4Q969I6 547 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SLC47A1Q96FL8 570 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 OXGR1Q96P68 337 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 KATNB1Q9BVA0 655 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 CACNG6Q9BXT2 260 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 OR11A1Q9GZK7 315 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 WDR55Q9H6Y2 383 aaPredicted RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 TMBIM4Q9HC24 238 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 A4GALTQ9NPC4 353 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 YAE1D1Q9NRH1 226 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.83□□□□□ -1.32
CD44-211ENST00000442151 RCE1Q9Y256 329 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 B3GALT5Q9Y2C3 310 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 SPEF1Q9Y4P9 236 aa6.83□□□□□ -1.32
CD44-211ENST00000442151 V9GYY5 206 aaPredicted RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 RAI1Q7Z5J4 1906 aaPredicted RBP6.83□□□□□ -1.32
CD44-211ENST00000442151 ARID1AO14497 2285 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 HEATR5AQ86XA9 2040 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 CENPVL1A0A0U1RR11 272 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 A8MV72 311 aaPredicted RBP6.82□□□□□ -1.32
CD44-211ENST00000442151 E7EQL1 145 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 PDE5AO76074 875 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 F12P00748 615 aaPredicted RBP6.82□□□□□ -1.32
CD44-211ENST00000442151 IGHV3-9P01782 118 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 IMPDH2P12268 514 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 ETFAP13804 333 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 IL12AP29459 219 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 PRKAR1BP31321 381 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 ACVR1BP36896 505 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 GZMKP49863 264 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 LOXL1Q08397 574 aaPredicted RBP6.82□□□□□ -1.32
CD44-211ENST00000442151 MPP2Q14168 576 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 TSPO2Q5TGU0 170 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 ANKRD16Q6P6B7 361 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 CREB3L2Q70SY1 520 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 SLC30A8Q8IWU4 369 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 GPR137CQ8N3F9 429 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 TMEM99Q8N816 258 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 PNPT1Q8TCS8 783 aaKnown RBP6.82□□□□□ -1.32
CD44-211ENST00000442151 DYDC1Q8WWB3 177 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 FAM168AQ92567 244 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 AURKBQ96GD4 344 aaPredicted RBP6.82□□□□□ -1.32
CD44-211ENST00000442151 TMEM19Q96HH6 336 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 RAB1BQ9H0U4 201 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 SLC7A10Q9NS82 523 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 CDC42EP3Q9UKI2 254 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 FBXL3Q9UKT7 428 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 CORINQ9Y5Q5 1042 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 USH1CQ9Y6N9 552 aa6.82□□□□□ -1.32
CD44-211ENST00000442151 LOC102725191A0A1B0GVB3 256 aa6.81□□□□□ -1.32
CD44-211ENST00000442151 PRAMEF27A3QJZ7 478 aa6.81□□□□□ -1.32
CD44-211ENST00000442151 B9A039 149 aa6.81□□□□□ -1.32
CD44-211ENST00000442151 INAFM1C9JVW0 142 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms