RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 WIPI2Q9Y4P8 454 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 FKBP7Q9Y680 259 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 TCOF1Q13428 1488 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 C3P01024 1663 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 RGS12O14924 1447 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 NHSL1Q5SYE7 1610 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 hCG_38984A0A1B0GV85 526 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 PRSS37A4D1T9 235 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 NKX6-3A6NJ46 265 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 LRRC30A6NM36 301 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR2AT4A6NND4 320 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 A8MU76 341 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 IMPA2O14732 288 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 B4GALT5O43286 388 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZSCAN12O43309 604 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 SNAI2O43623 268 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 SH3BGRLO75368 114 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 CST1P01037 141 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 FTH1P02794 183 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 MARK3P27448 753 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 CASP14P31944 242 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 SHMT2P34897 504 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 MPIP34949 423 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 TMED10P49755 219 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 PRELPP51888 382 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 PSMD4P55036 377 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 C21orf59P57076 290 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 DSCR9P59020 149 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 TAS2R60P59551 318 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 IL9RQ01113 521 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 SERTAD2Q14140 314 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 FLOT2Q14254 428 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 CTSL3PQ5NE16 218 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 GPR107Q5VW38 600 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 DMKNQ6E0U4 476 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF562Q6V9R5 426 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 C16orf82Q7Z2V1 217 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 SMIM15Q7Z3B0 74 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 FAM71AQ8IYT1 594 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF683Q8IZ20 524 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 CIARTQ8N365 385 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR5AU1Q8NGC0 362 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 MYDGFQ969H8 173 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 APOL2Q9BQE5 337 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 MED10Q9BTT4 135 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 DGCR6LQ9BY27 220 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 TM6SF2Q9BZW4 377 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 ELOVL6Q9H5J4 265 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 UBE2TQ9NPD8 197 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 PXMP2Q9NR77 195 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 MRM2Q9UI43 246 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 SELENOKQ9Y6D0 94 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 URGCP-MRPS24S4R325 110 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 EP400Q96L91 3159 aa3.52□□□□□ -1.85
CDC42BPA-207ENST00000441725 STK36Q9NRP7 1315 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 LOC105371242A0A075B767 164 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 F8W036 122 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 TIMM8AO60220 97 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 GATBO75879 557 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 H6PDO95479 791 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ANP32DO95626 131 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 APOC1P02654 83 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CRYGBP07316 175 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 GP1BAP07359 652 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 NR2C1P13056 603 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 RNH1P13489 461 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 C4BPBP20851 252 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 UGT1A4P22310 534 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 HLA-DMAP28067 261 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 PSMB5P28074 263 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 TEAD1P28347 426 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CRABP1P29762 137 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MAS1LP35410 378 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 UGT1A3P35503 534 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 UGT1A5P35504 534 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 RGRP47804 291 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 XGP55808 180 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MRPS6P82932 125 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 FLI1Q01543 452 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CSTF1Q05048 431 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ITPK1Q13572 414 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNHIT3Q15649 155 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CHI3L2Q15782 390 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 KNOP1Q1ED39 458 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 C1orf189Q5VU69 101 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MEDAGQ5VYS4 303 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SEL1L3Q68CR1 1132 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 TIGD3Q6B0B8 471 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 RBMS3Q6XE24 437 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 FOXL2NBQ6ZUU3 175 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 Q7L0L9 218 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 NFE4Q86UQ8 179 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MICU2Q8IYU8 434 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC22A15Q8IZD6 547 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SPEM1Q8N4L4 309 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 FAM83FQ8NEG4 500 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR6X1Q8NH79 312 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MARCH1Q8TCQ1 289 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CA5BP1Q8WTZ4 195 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 GATAD1Q8WUU5 269 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms