RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 H7BY64 318 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 I3L1I5 382 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 IMPA2O14732 288 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 GOSR1O95249 250 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 IGSF6O95976 241 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 CD63P08962 238 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 C1GALT1C1LP0DN25 315 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 NME1P15531 152 aaKnown RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 CPT2P23786 658 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 PPIAP62937 165 aaKnown RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 FOXK2Q01167 660 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 DYRK1AQ13627 763 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 ALKBH1Q13686 389 aaKnown RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 TEAD2Q15562 447 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 RTP2Q5QGT7 225 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 NIPAL3Q6P499 406 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 MEPCEQ7L2J0 689 aaKnown RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 FAM122BQ7Z309 247 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 ETFBKMTQ8IXQ9 262 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 WDSUB1Q8N9V3 476 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 FAM71CQ8NEG0 241 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 SDR9C7Q8NEX9 313 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 OR4E2Q8NGC2 313 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 NKD1Q969G9 470 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 SLC25A38Q96DW6 304 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 PRAP1Q96NZ9 151 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 CLCC1Q96S66 551 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF275Q9NSD4 429 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 RASL12Q9NYN1 266 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 TAC3Q9UHF0 121 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 TRBV5-4A0A0C4DH59 114 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 A6NLC8 198 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 EFCAB7A8K855 629 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 M0R036 132 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 KPNA3O00505 521 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 PLPP1O14494 284 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 RBBP9O75884 186 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 UBBP0CG47 229 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 UBCP0CG48 685 aaKnown RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 NPPBP16860 134 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 HTR2AP28223 471 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 TEAD1P28347 426 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 GDI1P31150 447 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 RORAP35398 523 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 OMPP47874 163 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 VEGFBP49765 207 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 PNLIPRP1P54315 467 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 AP1S1P61966 158 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 DEFA6Q01524 100 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 ST3GAL3Q11203 375 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 IKZF1Q13422 519 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 ERV3-1Q14264 604 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 ELAVL1Q15717 326 aaKnown RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 OR2B11Q5JQS5 317 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 OR52W1Q6IF63 320 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF425Q6IV72 752 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 CDPF1Q6NVV7 123 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 THSD4Q6ZMP0 1018 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 RNF165Q6ZSG1 346 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 Q6ZVU0 165 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 USP53Q70EK8 1073 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 HSD11B1LQ7Z5J1 315 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 TCEAL8Q8IYN2 117 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 OR5P2Q8WZ92 322 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 CNTNAP3BQ96NU0 1288 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 NAA11Q9BSU3 229 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 SLC25A32Q9H2D1 315 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 SLC38A1Q9H2H9 487 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 PRO1933Q9H354 126 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 POFUT1Q9H488 388 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 BRF2Q9HAW0 419 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 MYNNQ9NPC7 610 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 C20orf141Q9NUB4 165 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 GPN3Q9UHW5 284 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 RNF215Q9Y6U7 377 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 CPED1A4D0V7 1026 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 NPIPB8E9PQR5 432 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TMPRSS11DO60235 418 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 DOK2O60496 412 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 PQBP1O60828 265 aaKnown RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TXNDC12O95881 172 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 PLGP00747 810 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 IGLV3-27P01718 113 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 FGBP02675 491 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SDHAP31040 664 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CD70P32970 193 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 RPS27P42677 84 aaKnown RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SSR2P43308 183 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ATP1B3P54709 279 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 UBE2NLQ5JXB2 153 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF620Q6ZNG0 422 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TPRG1Q6ZUI0 275 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TTLL10Q6ZVT0 673 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CACUL1Q86Y37 369 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 NAXDQ8IW45 347 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 LRRC56Q8IYG6 542 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SPICQ8N5J4 248 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ARL14EPQ8N8R7 260 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 STOML3Q8TAV4 291 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms