RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MRPL28Q13084 256 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF267Q14586 743 aaPredicted RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 TOMM20Q15388 145 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF628Q5EBL2 1059 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ABHD17BQ5VST6 288 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 PRAMEF20Q5VT98 475 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 DESI1Q6ICB0 168 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 JMJD6Q6NYC1 403 aaPredicted RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF730Q6ZMV8 503 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 PLEKHM3Q6ZWE6 761 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 TRILQ7L0X0 811 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 CPEB2Q7Z5Q1 589 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 KIF18BQ86Y91 864 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF440Q8IYI8 595 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 UBQLNLQ8IYU4 475 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 CDK20Q8IZL9 346 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 BEST3Q8N1M1 668 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 LNX2Q8N448 690 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 TMEM156Q8N614 296 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 IL17RDQ8NFM7 739 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ADAMTS17Q8TE56 1095 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 DNAJA4Q8WW22 397 aaPredicted RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ASB15Q8WXK1 588 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 SNRNP40Q96DI7 357 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 RNFT2Q96EX2 444 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 SLC41A3Q96GZ6 507 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 RBM18Q96H35 190 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 SDHCQ99643 169 aaPredicted RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 LMF2Q9BU23 707 aaKnown RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 MRI1Q9BV20 369 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 MKKSQ9NPJ1 570 aaPredicted RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ABCB10Q9NRK6 738 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 TVP23BQ9NYZ1 205 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 AASSQ9UDR5 926 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF223Q9UK11 482 aaPredicted RBP4.34□□□□□ -1.71
EDEM3-203ENST00000439962 DAPP1Q9UN19 280 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 ALPK2Q86TB3 2170 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 DOPEY1Q5JWR5 2465 aa4.34□□□□□ -1.71
EDEM3-203ENST00000439962 FAM172BPA6NC97 362 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 HMX3A6NHT5 357 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 HSPB2A8KAH6 182 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 C17orf105B2RV13 164 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 M0R3H8 397 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 TBX1O43435 398 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 TLX2O43763 284 aaPredicted RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 FGF17O60258 216 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 ITGA10O75578 1167 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 NKX2-2O95096 273 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 SERPINA3P01011 423 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 ITGB2P05107 769 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 HSMCR30P0CW71 290 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 PLA2G2AP14555 144 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 POU2F1P14859 743 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 POU1F1P28069 291 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 RPS19P39019 145 aaKnown RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 CASP3P42574 277 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 HSF2Q03933 536 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 PIN1Q13526 163 aaPredicted RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 FAM53BQ14153 422 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 LASP1Q14847 261 aaKnown RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 HSPB2Q16082 182 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 GARNL3Q5VVW2 1013 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 OR5M10Q6IEU7 315 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 TYW3Q6IPR3 259 aaKnown RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 MZT2BQ6NZ67 158 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 CCBE1Q6UXH8 406 aaPredicted RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 DGAT2L6Q6ZPD8 337 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 GDF7Q7Z4P5 450 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 GALNTL5Q7Z4T8 443 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 MDGA2Q7Z553 956 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 ANKRD37Q7Z713 158 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 RDH10Q8IZV5 341 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 CARFQ8N187 725 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 CA13Q8N1Q1 262 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 ZADH2Q8N4Q0 377 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 ARIH2OSQ8N7S6 290 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 RBMXL3Q8N7X1 1067 aaKnown RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 OR52L1Q8NGH7 329 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 VANGL1Q8TAA9 524 aaPredicted RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 CTHRC1Q96CG8 243 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 SIGLEC12Q96PQ1 595 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 MCHR1Q99705 422 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 RSPO3Q9BXY4 272 aaPredicted RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 SLC19A3Q9BZV2 496 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 EQTNQ9NQ60 294 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 MRPL39Q9NYK5 338 aaKnown RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 DNAJC27Q9NZQ0 273 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 H2AFY2Q9P0M6 372 aaPredicted RBP4.34□□□□□ -1.72
EDEM3-203ENST00000439962 KLHL21Q9UJP4 597 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 WDR45Q9Y484 360 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 NOX1Q9Y5S8 564 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 UNC79Q9P2D8 2635 aa4.34□□□□□ -1.72
EDEM3-203ENST00000439962 IGHV1-45A0A0A0MS14 117 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 FITM1A5D6W6 292 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 UNC119BA6NIH7 251 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 J3QKU1 62 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 CLDN4O14493 209 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 IDH3BO43837 385 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 OR2J2O76002 312 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 LIMS3P0CW19 117 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms