RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 PAQR6Q6TCH4 344 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 CASP12Q6UXS9 341 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 ZCCHC23Q6ZST2 131 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 USP43Q70EL4 1123 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 SLC46A3Q7Z3Q1 461 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 RIMKLAQ8IXN7 391 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 ZNF614Q8N883 585 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 POMGNT2Q8NAT1 580 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 OR4F15Q8NGB8 312 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 MIPOL1Q8TD10 442 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 MAGEE2Q8TD90 523 aaPredicted RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 FAM216AQ8WUB2 273 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 STMN2Q93045 179 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 SLC7A6OSQ96CW6 309 aaPredicted RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 VRK1Q99986 396 aaPredicted RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 SF3B5Q9BWJ5 86 aaKnown RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 OR11A1Q9GZK7 315 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 SERHL2Q9H4I8 314 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 ZNF442Q9H7R0 627 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 MOV10Q9HCE1 1003 aaKnown RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 EXOSC3Q9NQT5 275 aaKnown RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 POLE3Q9NRF9 147 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 ATAD3AQ9NVI7 634 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 NDE1Q9NXR1 346 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 UPB1Q9UBR1 384 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 MARCOQ9UEW3 520 aaPredicted RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 SLC35A3Q9Y2D2 325 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 DNAJC15Q9Y5T4 150 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 TMEM129A0AVI4 362 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 TRPC5OSA6NMA1 111 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 B2RBV5 119 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 B4DSR2 109 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 FAM157AC9JC47 383 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 GSC2O15499 205 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 BCAS1O75363 584 aaPredicted RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 CRYAAP02489 173 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 UBTFL6P0CB48 400 aaPredicted RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 T-ENOLP0DO92 83 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 IMPDH2P12268 514 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 HOXB1P14653 301 aaPredicted RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 APEX1P27695 318 aaKnown RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 HTR3AP46098 478 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 RPL14P50914 215 aaKnown RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 OR2B6P58173 313 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 HBA1P69905 142 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 NAAAQ02083 359 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 PLAURQ03405 335 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 HGFACQ04756 655 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 GPR68Q15743 365 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 SPDYE7PQ495Y7 208 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 HIKESHIQ53FT3 197 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 C9orf135Q5VTT2 229 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 KLHL24Q6TFL4 600 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 SPATA19Q7Z5L4 167 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 OR5D16Q8NGK9 328 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 BCL2L2Q92843 193 aaPredicted RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 PMM1Q92871 262 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 RSRC1Q96IZ7 334 aaKnown RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 NAA11Q9BSU3 229 aaPredicted RBP6.84□□□□□ -1.31
LINC00578-201ENST00000439009 CCDC28BQ9BUN5 200 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 RACGAP1Q9H0H5 632 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 DCLRE1BQ9H816 532 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 ARL8BQ9NVJ2 186 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 TMEM45AQ9NWC5 275 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 MKLN1Q9UL63 735 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 PCDHGB4Q9UN71 923 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 SPEF1Q9Y4P9 236 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 PCDHB14Q9Y5E9 798 aa6.84□□□□□ -1.31
LINC00578-201ENST00000439009 FAAHO00519 579 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 HDAC3O15379 428 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 ITM2AO43736 263 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 CYP7B1O75881 506 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 CHEK2O96017 543 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 IGKV3-15P01624 115 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 ERCC1P07992 297 aaPredicted RBP6.83□□□□□ -1.32
LINC00578-201ENST00000439009 CECR9P0C854 216 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 PRPS1L1P21108 318 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 MATN1P21941 496 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 MAPK1P28482 360 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 CALCRP30988 508 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 GTF2A1P52655 376 aaPredicted RBP6.83□□□□□ -1.32
LINC00578-201ENST00000439009 HILS1P60008 231 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 RPS26P62854 115 aaKnown RBP6.83□□□□□ -1.32
LINC00578-201ENST00000439009 KCNJ10P78508 379 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 LGALS3BPQ08380 585 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 SCGB2A2Q13296 93 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 PTGR1Q14914 329 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 MAPRE2Q15555 327 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 TRMT5Q32P41 509 aaKnown RBP6.83□□□□□ -1.32
LINC00578-201ENST00000439009 TBRG1Q3YBR2 411 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 XKR7Q5GH72 579 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 PRR31Q5SQ13 230 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 TYW3Q6IPR3 259 aaKnown RBP6.83□□□□□ -1.32
LINC00578-201ENST00000439009 EPGNQ6UW88 154 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 C6orf120Q7Z4R8 191 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 ABHD12BQ7Z5M8 362 aaPredicted RBP6.83□□□□□ -1.32
LINC00578-201ENST00000439009 NET1Q7Z628 596 aaPredicted RBP6.83□□□□□ -1.32
LINC00578-201ENST00000439009 C3orf56Q8N813 242 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 ANKK1Q8NFD2 765 aa6.83□□□□□ -1.32
LINC00578-201ENST00000439009 OR9K2Q8NGE7 335 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms