RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 EIF2B5Q13144 721 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 TRMT12Q53H54 448 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 HACD4Q5VWC8 232 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PWWP2BQ6NUJ5 590 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 C17orf99Q6UX52 265 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 SPICQ8N5J4 248 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF511Q8NB15 262 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ZCCHC10Q8TBK6 192 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 NSMAFQ92636 917 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 IGSF21Q96ID5 467 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 Q96M85 177 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 CMC2Q9NRP2 79 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 MED17Q9NVC6 651 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PURGQ9UJV8 347 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ABT1Q9ULW3 272 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 TRIOO75962 3097 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 CCL16O15467 120 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 GSTZ1O43708 216 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 OR2T1O43869 369 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 SERPINA3P01011 423 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PCCBP05166 539 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 OR8G3PP0DMU2 310 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ADCYAP1P18509 176 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PPP2CBP62714 309 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PPP2CAP67775 309 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 UBXN2BQ14CS0 331 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PABPC1L2AQ5JQF8 200 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 LCTLQ6UWM7 567 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 LRRTM1Q86UE6 522 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 OR51A4Q8NGJ6 313 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 OR52A5Q9H2C5 316 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 KCNE5Q9UJ90 142 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 RTTNQ86VV8 2226 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 GAAP10253 952 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF3P17036 446 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 CSNK2A2P19784 350 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 BTN3A2P78410 334 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 SRSF5Q13243 272 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ZAR1Q86SH2 424 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 LNX2Q8N448 690 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 RGP1Q92546 391 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 NUS1Q96E22 293 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 HSPA12BQ96MM6 686 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 C7orf50Q9BRJ6 194 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 KCNK6Q9Y257 313 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 FARSAQ9Y285 508 aaKnown RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 SIGLEC7Q9Y286 467 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 IER3IP1Q9Y5U9 82 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 NUP210Q8TEM1 1887 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-204ENST00000438964 A0A1W2PPV9 198 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 ADAM11O75078 769 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 NGFRP08138 427 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 LAMP2P13473 410 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 ADRA2CP18825 462 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 NDUFS1P28331 727 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 MPGP29372 298 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 BDKRB2P30411 391 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 TMEM44Q2T9K0 475 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 AMZ1Q400G9 498 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF658BQ4V348 819 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-204ENST00000438964 TMEM71Q6P5X7 295 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 ETV3LQ6ZN32 361 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 HTR3DQ70Z44 454 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 PDCD10Q9BUL8 212 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 CACYBPQ9HB71 228 aaKnown RBP12.28□□□□□ -0.44
ACTN1-204ENST00000438964 SAGE1Q9NXZ1 904 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 GTF2A1LQ9UNN4 478 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 PLEKHA6Q9Y2H5 1048 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 OR1A2Q9Y585 309 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 TRBV23OR9-2A0A075B6M9 112 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 TRAV14DV4A0A0A6YYC5 116 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 SYT5O00445 386 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 EMC8O43402 210 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF254O75437 659 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 GPANK1O95872 356 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF806P0C7X5 589 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 GALP22466 123 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 HIST1H1TP22492 207 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-204ENST00000438964 RPL4P36578 427 aaKnown RBP12.28□□□□□ -0.44
ACTN1-204ENST00000438964 AP3S2P59780 193 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 DHODHQ02127 395 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 RBM39Q14498 530 aaKnown RBP12.28□□□□□ -0.44
ACTN1-204ENST00000438964 SCGB2B2Q4G0G5 96 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 OR51D1Q8NGF3 324 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 PAQR8Q8TEZ7 354 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 RASD2Q96D21 266 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 DTD2Q96FN9 168 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 LCORQ96JN0 433 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-204ENST00000438964 POFUT1Q9H488 388 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 V9GY05 133 aa12.28□□□□□ -0.44
ACTN1-204ENST00000438964 TRAV18A0A075B6X5 111 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms