RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MARCH3Q86UD3 253 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 OR2L13Q8N349 312 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 BCORP1Q8N888 145 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 OR4N2Q8NGD1 307 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 PNPLA2Q96AD5 504 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 EDEM2Q9BV94 578 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 MLXQ9UH92 298 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 MGAT4AQ9UM21 535 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 CACNA1HO95180 2353 aa10.65□□□□□ -0.71
TRAPPC9-202ENST00000438773 TEX13CA0A0J9YWL9 993 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 RGS9O75916 674 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 ATP1B1P05026 303 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 S100A6P06703 90 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 ADRA2AP08913 450 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 APEX1P27695 318 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PPICP45877 212 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PCBP3P57721 371 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 FOXK2Q01167 660 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 MLLT11Q13015 90 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SRSF5Q13243 272 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SCGB2B2Q4G0G5 96 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SYT14P1Q58G82 188 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PDSS1Q5T2R2 415 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 ABHD17BQ5VST6 288 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC35F2Q8IXU6 374 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 LDAHQ9H6V9 325 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 NUDT15Q9NV35 164 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 CLEC2DQ9UHP7 191 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 USP34Q70CQ2 3546 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PTTG1O95997 202 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF806P0C7X5 589 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 APEHP13798 732 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC1A3P43003 542 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 NOVA1P51513 510 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 EPHA4P54764 986 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 IRF3Q14653 427 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 DCAF12Q5T6F0 453 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 TMEM71Q6P5X7 295 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 CNIH2Q6PI25 160 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 OPN5Q6U736 354 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 CMIPQ8IY22 773 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 DTWD2Q8NBA8 298 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 C4orf36Q96KX1 117 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 LRRN3Q9H3W5 708 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 BABAM2Q9NXR7 383 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 GBF1Q92538 1859 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SVILO95425 2214 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 M0R233 179 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 RRP8O43159 456 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 ERGP11308 486 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PRKACBP22694 351 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 AP3S2P59780 193 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SNRPGP62308 76 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 UBE2IP63279 158 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PITPNAQ00169 270 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 EEF1A1P5Q5VTE0 462 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC46A3Q7Z3Q1 461 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 NOXA1Q86UR1 476 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR5W2Q8NH69 310 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR14L1PQ8NHC6 308 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SDHCQ99643 169 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 CACNG6Q9BXT2 260 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 B3GNT4Q9C0J1 378 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 DPAGT1Q9H3H5 408 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 NUP50Q9UKX7 468 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PADI1Q9ULC6 663 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 A4GNTQ9UNA3 340 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 PTPRDP23468 1912 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 CRYZL1O95825 349 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 ADAM8P78325 824 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 NTRK2Q16620 822 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 YOD1Q5VVQ6 348 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR2T35Q8NGX2 323 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 SIGLEC11Q96RL6 698 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 EXO1Q9UQ84 846 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 NLRC5Q86WI3 1866 aa10.64□□□□□ -0.71
TRAPPC9-202ENST00000438773 COL4A4P53420 1690 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC16A7O60669 478 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 CD3GP09693 182 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 PSMB10P40306 273 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 C1orf94Q6P1W5 598 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 GUSBP11Q6P575 273 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF620Q6ZNG0 422 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 KMT5CQ86Y97 462 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC22A18ASQ8N1D0 253 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR6F1Q8NGZ6 308 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 PPP1R14AQ96A00 147 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 C8orf44Q96CB5 159 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 KLHL15Q96M94 604 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 FOXN4Q96NZ1 517 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 NMNAT3Q96T66 252 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 CDC6Q99741 560 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 IER2Q9BTL4 223 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 NXT1Q9UKK6 140 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 IFNA7P01567 189 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 IFNA6P05013 189 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms