RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CGAP01215 116 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 GRPRP30550 384 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 IFNA8P32881 189 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 RBM34P42696 430 aaKnown RBP14.37□□□□□ -0.11
SNRPB-202ENST00000438552 P2RY4P51582 365 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 LTBQ06643 244 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 ST3GAL3Q11203 375 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 TMEM201Q5SNT2 666 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 NUFIP2Q7Z417 695 aaKnown RBP14.37□□□□□ -0.11
SNRPB-202ENST00000438552 ZNF417Q8TAU3 575 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 TMEM239Q8WW34 195 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 LRGUKQ96M69 825 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 ZNF587Q96SQ5 575 aaPredicted RBP14.37□□□□□ -0.11
SNRPB-202ENST00000438552 SEPHS2Q99611 448 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 PIGMQ9H3S5 423 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 BCO1Q9HAY6 547 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 GP6Q9HCN6 339 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 MEPEQ9NQ76 525 aaPredicted RBP14.37□□□□□ -0.11
SNRPB-202ENST00000438552 NPDC1Q9NQX5 325 aaPredicted RBP14.37□□□□□ -0.11
SNRPB-202ENST00000438552 JKAMPQ9P055 326 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 PROCRQ9UNN8 238 aa14.37□□□□□ -0.11
SNRPB-202ENST00000438552 IGKV3D-15A0A087WSY6 115 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 STAMBPO95630 424 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 MT-ND1P03886 318 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 FABP3P05413 133 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 YES1P07947 543 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 COL8A1P27658 744 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 SLC16A1P53985 500 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 TRAP1Q12931 704 aaKnown RBP14.36□□□□□ -0.11
SNRPB-202ENST00000438552 SLC17A1Q14916 467 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 TRAM2Q15035 370 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 ZSCAN26Q16670 478 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 IQCCQ4KMZ1 466 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 EEF1A1P5Q5VTE0 462 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 HIST2H2BCQ6DN03 193 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.36□□□□□ -0.11
SNRPB-202ENST00000438552 GPAT4Q86UL3 456 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 ZDHHC21Q8IVQ6 265 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 OR6S1Q8NH40 331 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 TACO1Q9BSH4 297 aaKnown RBP14.36□□□□□ -0.11
SNRPB-202ENST00000438552 SLC19A3Q9BZV2 496 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 TRIM15Q9C019 465 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 CHST11Q9NPF2 352 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 C20orf141Q9NUB4 165 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 EMC3Q9P0I2 261 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 SLC7A8Q9UHI5 535 aa14.36□□□□□ -0.11
SNRPB-202ENST00000438552 FAM32AQ9Y421 112 aaKnown RBP14.36□□□□□ -0.11
SNRPB-202ENST00000438552 HECTD1Q9ULT8 2610 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 FREM1Q5H8C1 2179 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 ZNF724A8MTY0 619 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 MSTNO14793 375 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 CH25HO95992 272 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 CD8BP10966 210 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 RHCEP18577 417 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 EDNRAP25101 427 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 LSM11P83369 360 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNRPB-202ENST00000438552 FLOT2Q14254 428 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 PDK3Q15120 406 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 ZNF74Q16587 644 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 FGD3Q5JSP0 725 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 SLC46A3Q7Z3Q1 461 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 ZNF610Q8N9Z0 462 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 PIK3C3Q8NEB9 887 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 OR9K2Q8NGE7 335 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 PIP5K1AQ99755 562 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 RBM24Q9BX46 236 aaKnown RBP14.35□□□□□ -0.11
SNRPB-202ENST00000438552 ASPNQ9BXN1 380 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 NMNAT1Q9HAN9 279 aaPredicted RBP14.35□□□□□ -0.11
SNRPB-202ENST00000438552 GALNT8Q9NY28 637 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 POMPQ9Y244 141 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 TESMINQ9Y4I5 508 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 FLVCR1Q9Y5Y0 555 aa14.35□□□□□ -0.11
SNRPB-202ENST00000438552 MT-ATP6P00846 226 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 H1F0P07305 194 aaKnown RBP14.34□□□□□ -0.11
SNRPB-202ENST00000438552 NQO1P15559 274 aaKnown RBP14.34□□□□□ -0.11
SNRPB-202ENST00000438552 ITGA2P17301 1181 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 UQCRC1P31930 480 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 ERFP50548 548 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 IL1RL1Q01638 556 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 SPIBQ01892 262 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 MFSD13AQ14CX5 517 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 EXOC3L2Q2M3D2 409 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 FBXL19-AS1Q494R0 122 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 TMEM225Q6GV28 225 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 TFAP2EQ6VUC0 442 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 H1FNTQ75WM6 255 aaPredicted RBP14.34□□□□□ -0.11
SNRPB-202ENST00000438552 YTHDF3Q7Z739 585 aaKnown RBP14.34□□□□□ -0.11
SNRPB-202ENST00000438552 MEX3DQ86XN8 651 aaKnown RBP14.34□□□□□ -0.11
SNRPB-202ENST00000438552 KDM8Q8N371 416 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 LRRC17Q8N6Y2 441 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 ADPRHL1Q8NDY3 354 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 RNASE6Q93091 150 aaKnown RBP14.34□□□□□ -0.11
SNRPB-202ENST00000438552 HS6ST2Q96MM7 605 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 KLHL4Q9C0H6 718 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 FKRPQ9H9S5 495 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 IL1RAPQ9NPH3 570 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 RASD1Q9Y272 281 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 NOSIPQ9Y314 301 aaKnown RBP14.34□□□□□ -0.11
SNRPB-202ENST00000438552 MED31Q9Y3C7 131 aa14.34□□□□□ -0.11
SNRPB-202ENST00000438552 CORINQ9Y5Q5 1042 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms