RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SUDS3Q9H7L9 328 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-204ENST00000438419 FOLH1BQ9HBA9 442 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 KCNIP3Q9Y2W7 256 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 NPTNQ9Y639 398 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 KANK1Q14678 1352 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 KDM6BO15054 1643 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 THSD7BQ9C0I4 1608 aa2.53□□□□□ -2
TRAPPC13-204ENST00000438419 NSG1A0A0A6YYJ2 146 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 A0A0J9YXY3 114 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 FAM231BA6NCW3 169 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 OR52A4PA6NMU1 304 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 H0Y8G0 127 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 GFYI3L273 518 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 HSD17B6O14756 317 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 IGLV1-47P01700 117 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 P04436 131 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 KLK3P07288 261 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 ATP1B2P14415 290 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 ETS2P15036 469 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 MGMTP16455 207 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 NPR2P20594 1047 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 CXCR2P25025 360 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 RFC4P35249 363 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 KLK7P49862 253 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 TPMTP51580 245 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 CRYBB1P53674 252 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 CDH4P55283 916 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 RPL23AP62750 156 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 TGFBR3Q03167 851 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 KLF17Q5JT82 389 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 PRAMEF5Q5TYX0 476 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 C1orf146Q5VVC0 180 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 PRAMEF6Q5VXH4 476 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 RUFY3Q7L099 469 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 GDPD3Q7L5L3 318 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 TAS2R42Q7RTR8 314 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 NANOGNBQ7Z5D8 188 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 CDH26Q8IXH8 852 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 RDH10Q8IZV5 341 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 NECAB1Q8N987 351 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 DCUN1D4Q92564 292 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 CNDP1Q96KN2 507 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 OXGR1Q96P68 337 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 PANX2Q96RD6 677 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 TSG101Q99816 390 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 PPA2Q9H2U2 334 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 OR51J1Q9H342 316 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 RNF167Q9H6Y7 350 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 ZDHHC11Q9H8X9 412 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 ETNK2Q9NVF9 386 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 ZNF639Q9UID6 485 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 KIF25Q9UIL4 384 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 SH3TC1Q8TE82 1336 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 GTF3C1Q12789 2109 aa2.52□□□□□ -2.01
TRAPPC13-204ENST00000438419 IGHV3OR16-13A0A075B7E8 117 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 IGHV1OR21-1A0A087WYE8 117 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 FAM47DPA6NHR8 397 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 AP3B1O00203 1094 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 EMC8O43402 210 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 MMP23AO75900 390 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 SNAPINO95295 136 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 UQCRFS1P1P0C7P4 283 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 RPS2P15880 293 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 GABRR1P24046 479 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 CD1CP29017 333 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 DDOSTP39656 456 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 APOC4P55056 127 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 ATP5IP56385 69 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 TIMM10P62072 90 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 MRPL28Q13084 256 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 ORC2Q13416 577 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 OR5I1Q13606 314 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 ARFRP1Q13795 201 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 MICBQ29980 383 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 PARP15Q460N3 678 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 C6orf226Q5I0X4 101 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 CTSL3PQ5NE16 218 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 LRRC31Q6UY01 552 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 C19orf35Q6ZS72 473 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 NUDCD3Q8IVD9 361 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 SDR9C7Q8NEX9 313 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 OR9K2Q8NGE7 335 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 OR1L6Q8NGR2 347 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 RNF139Q8WU17 664 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 TPD52L3Q96J77 140 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 C12orf42Q96LP6 360 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 PLEKHF1Q96S99 279 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 HIST1H4GQ99525 98 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 ARHGDIGQ99819 225 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 CHRDL1Q9BU40 450 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 AZI2Q9H6S1 392 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 NMRAL1Q9HBL8 299 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 SLC7A8Q9UHI5 535 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 ARHGAP23Q9P227 1491 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 WDR62O43379 1518 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 MRC2Q9UBG0 1479 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 XKRY2A2RUG3 117 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 OR5B21A6NL26 309 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 LOC110117498-PIK3R3F6TDL0 507 aa2.51□□□□□ -2.01
TRAPPC13-204ENST00000438419 ABCD4O14678 606 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms