RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 ZNF761Q86XN6 746 aaPredicted RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 ARL6IP6Q8N6S5 226 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 POGLUT1Q8NBL1 392 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 CD180Q99467 661 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 C7orf50Q9BRJ6 194 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 SARGQ9BW04 601 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 HCAR1Q9BXC0 346 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 SPTBP11277 2137 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 TRDV1A0A1B0GX56 115 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 ARPC5O15511 151 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 IGHV2-70P01814 119 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 GYPBP06028 91 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 NOS3P29474 1203 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 SMAD4Q13485 552 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 SF3A2Q15428 464 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 ZNF542PQ5EBM4 170 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 FAM27D1Q5T7N8 215 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 PRAMEF8Q5VWM4 474 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 PRAMEF7Q5VXH5 474 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 BTN2A1Q7KYR7 527 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 RANBP3LQ86VV4 465 aaPredicted RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 SFTPA2Q8IWL1 248 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 ACBD7Q8N6N7 88 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 CREB3L1Q96BA8 519 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 TMEM68Q96MH6 324 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 MTIF3Q9H2K0 278 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 SIDT1Q9NXL6 827 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 USP36Q9P275 1121 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 POMT2Q9UKY4 750 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 HEBP2Q9Y5Z4 205 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 ARID1AO14497 2285 aa11.27□□□□□ -0.61
SEMA3F-206ENST00000434342 TRANK1O15050 2925 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 DAPL1A0PJW8 107 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 K7EQS6 105 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 EEF1E1O43324 174 aaKnown RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 CHST10O43529 356 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 PEPDP12955 493 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 CXCL2P19875 107 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 GIFP27352 417 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 HTR1FP30939 366 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 WDR88Q6ZMY6 472 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 KIR3DX1Q9H7L2 352 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 KLHL1Q9NR64 748 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 TRAV27A0A087WT01 109 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 UNC119BA6NIH7 251 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 LINC01565O15544 149 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 PLRG1O43660 514 aaKnown RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 CPMP14384 443 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 MAKP20794 623 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 NTSR1P30989 418 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 PBX2P40425 430 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 SKP2Q13309 424 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 OR1Q1Q15612 314 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 ST3GAL2Q16842 350 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 FBXO46Q6PJ61 603 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 FIGLAQ6QHK4 219 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 ZNF322Q6U7Q0 402 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 TMEM99Q8N816 258 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 DAPP1Q9UN19 280 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 A0A1B0GTQ1 180 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 ZGLP1P0C6A0 271 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 CLUP10909 449 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 HPGDP15428 266 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 GABRA3P34903 492 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 KIR2DL1P43626 348 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 PPP3R1P63098 170 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 SHC2P98077 582 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 TFF2Q03403 129 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 RELQ04864 619 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 SMCO1Q147U7 214 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 GUCA2BQ16661 112 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 LRRN1Q6UXK5 716 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 MRGPREQ86SM8 312 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 BPIFCQ8NFQ6 507 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 OR13C2Q8NGS9 318 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 TMEM239Q8WW34 195 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 ALG8Q9BVK2 526 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 ARL6Q9H0F7 186 aa11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 GPN3Q9UHW5 284 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 SIRT4Q9Y6E7 314 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-206ENST00000434342 A0A1W2PPK0 400 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 TRAPPC13A5PLN9 417 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 D6RAR5 112 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 FGF17O60258 216 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 HTR2AP28223 471 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 ZNF136P52737 540 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 DCST2Q5T1A1 773 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 PDZD9Q8IXQ8 264 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 CDK20Q8IZL9 346 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 WDSUB1Q8N9V3 476 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 SENP5Q96HI0 755 aaPredicted RBP11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 OR2A5Q96R48 311 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 ATF6BQ99941 703 aa11.25□□□□□ -0.61
SEMA3F-206ENST00000434342 MCOLN1Q9GZU1 580 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms