RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 OR6A2O95222 327 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 CH25HO95992 272 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 THY1P04216 161 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 THRBP10828 461 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 ITGA2P17301 1181 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 TFF3Q07654 80 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 TRIM25Q14258 630 aaKnown RBP13.8□□□□□ -0.2
TREX1-201ENST00000433541 TRAM2Q15035 370 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 GUSBP1Q15486 140 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 FGD3Q5JSP0 725 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 BEND4Q6ZU67 534 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 TSPYL5Q86VY4 417 aaPredicted RBP13.8□□□□□ -0.2
TREX1-201ENST00000433541 NKAIN4Q8IVV8 208 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 FAM86B1Q8N7N1 296 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 TMEM239Q8WW34 195 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 APH1AQ96BI3 265 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 SEPHS2Q99611 448 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 BCO1Q9HAY6 547 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 PLSCR4Q9NRQ2 329 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 RASD1Q9Y272 281 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 MED31Q9Y3C7 131 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 ENPP4Q9Y6X5 453 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 ENO4A6NNW6 628 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 ZNF716A6NP11 495 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 DNAJC8O75937 253 aaPredicted RBP13.79□□□□□ -0.2
TREX1-201ENST00000433541 KRT33AO76009 404 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 VAMP5O95183 116 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 MT-ATP6P00846 226 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 FABP3P05413 133 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 ZNF43P17038 809 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 ATP6V1B2P21281 511 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 AHCYP23526 432 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 PEX19P40855 299 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 RBM34P42696 430 aaKnown RBP13.79□□□□□ -0.2
TREX1-201ENST00000433541 H3F3AP84243 136 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 BNIP1Q12981 228 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 PDK3Q15120 406 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 ZNF787Q6DD87 383 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 ZNF730Q6ZMV8 503 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 CCDC121Q6ZUS5 278 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 H1FNTQ75WM6 255 aaPredicted RBP13.79□□□□□ -0.2
TREX1-201ENST00000433541 OFCC1Q8IZS5 231 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 KDM8Q8N371 416 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 OR9K2Q8NGE7 335 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 PFN4Q8NHR9 129 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 ASB9Q96DX5 294 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 HS6ST2Q96MM7 605 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 MOGAT1Q96PD6 335 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 SLC19A3Q9BZV2 496 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 NANSQ9NR45 359 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 PARPBPQ9NWS1 579 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 JKAMPQ9P055 326 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 SEC14L4Q9UDX3 406 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 A4GNTQ9UNA3 340 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 CORINQ9Y5Q5 1042 aa13.79□□□□□ -0.2
TREX1-201ENST00000433541 IGKV3D-15A0A087WSY6 115 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 TUBAL3A6NHL2 446 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 FTCDNL1E5RQL4 147 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 LRRN3E7EW58 273 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 C11orf98E9PRG8 122 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 HNRNPRO43390 633 aaKnown RBP13.78□□□□□ -0.2
TREX1-201ENST00000433541 DIRAS1O95057 198 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 CGAP01215 116 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 IGHV3-9P01782 118 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 BGLAPP02818 100 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 MT-ND1P03886 318 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 ADORA3P0DMS8 318 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 CD79BP40259 229 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 KIR2DL3P43628 341 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 SLC16A1P53985 500 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 UGT2B15P54855 530 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 SPIBQ01892 262 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 FAM27E3Q08E93 113 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 SLC17A1Q14916 467 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 FXNQ16595 210 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 FBXL19-AS1Q494R0 122 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 TFAP2EQ6VUC0 442 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 AAED1Q7RTV5 226 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 NANOGNBQ7Z5D8 188 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 ZDHHC21Q8IVQ6 265 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 CDK20Q8IZL9 346 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 OR6S1Q8NH40 331 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 MARVELD3Q96A59 401 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 SLC7A6OSQ96CW6 309 aaPredicted RBP13.78□□□□□ -0.2
TREX1-201ENST00000433541 PRSS27Q9BQR3 290 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 SF3B5Q9BWJ5 86 aaKnown RBP13.78□□□□□ -0.2
TREX1-201ENST00000433541 SLC24A3Q9HC58 644 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 ELOVL5Q9NYP7 299 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 UPB1Q9UBR1 384 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 B3GALT5Q9Y2C3 310 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 FLVCR1Q9Y5Y0 555 aa13.78□□□□□ -0.2
TREX1-201ENST00000433541 ASH1LQ9NR48 2969 aaKnown RBP13.77□□□□□ -0.2
TREX1-201ENST00000433541 C16orf97H3BN30 126 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 AKAP8O43823 692 aaKnown RBP13.77□□□□□ -0.21
TREX1-201ENST00000433541 PIP5K1CO60331 668 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.21
TREX1-201ENST00000433541 LYPD3O95274 346 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms