RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TTC21BQ7Z4L5 1316 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 EVC2Q86UK5 1308 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 IGHV7-81A0A0B4J1V7 117 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 A0A1W2PPV9 198 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 K7N7A8 449 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 WWP2O00308 870 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 FOXE1O00358 373 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR10H3O60404 316 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 N4BP1O75113 896 aaKnown RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 LYPLA1O75608 230 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 AP2A1O95782 977 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 PGK1P00558 417 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 IGHV3-48P01763 117 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 AQP1P29972 269 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 YWHABP31946 246 aaKnown RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 DDOSTP39656 456 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 CDH4P55283 916 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 BST1Q10588 318 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZMYND11Q15326 602 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 PRR30Q53SZ7 412 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 CARD16Q5EG05 197 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 C6orf226Q5I0X4 101 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 CTSL3PQ5NE16 218 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLC25A30Q5SVS4 291 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR2G6Q5TZ20 316 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 ATL3Q6DD88 541 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 SPINK14Q6IE38 97 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 SMIM5Q71RC9 77 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 PPP1R27Q86WC6 154 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF677Q86XU0 584 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 APOBEC3FQ8IUX4 373 aaKnown RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 CDH26Q8IXH8 852 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 LINC00612Q8N6U2 182 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 FAM83FQ8NEG4 500 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 MAGEE2Q8TD90 523 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 RNF139Q8WU17 664 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 CHCHD10Q8WYQ3 142 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 UBE2E3Q969T4 207 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 C10orf35Q96D05 121 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 GCOM2Q9BZD3 368 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 RAB34Q9BZG1 259 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 Q9H3A6 140 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 AZI2Q9H6S1 392 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 NIPAL2Q9H841 368 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 METTL7AQ9H8H3 244 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 PRPF19Q9UMS4 504 aaKnown RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 PHF3Q92576 2039 aaKnown RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 ALS2Q96Q42 1657 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 LRRC37A3O60309 1634 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 PAPPAQ13219 1627 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ABCC6O95255 1503 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 A0A0G2JRQ6 117 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 HELTA6NFD8 242 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 CCDC169A6NNP5 214 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF716A6NP11 495 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 IDSB3KWA1 339 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 E7ESA3 106 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 H0Y8G0 127 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 GFYI3L273 518 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 PHOX2AO14813 284 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 HCN1O60741 890 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 PFKFB2O60825 505 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLITRK3O94933 977 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 DIRAS1O95057 198 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 CLDN9O95484 217 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ALOX5P09917 674 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF735P0CB33 412 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 RNH1P13489 461 aaKnown RBP2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 GCAP28676 217 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 GCKP35557 465 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 RPL13AP40429 203 aaKnown RBP2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 SULT1E1P49888 294 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ATP1B3P54709 279 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 KIAA0040Q15053 153 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF77Q15935 545 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 GSG1Q2KHT4 349 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 CCDC183Q5T5S1 534 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 CCDC137Q6PK04 289 aaKnown RBP2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 WDR74Q6RFH5 385 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 UNQ9370/PRO34162Q6UXP9 181 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 FRA10AC1Q70Z53 315 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 PRSS41Q7RTY9 318 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 H2BFWTQ7Z2G1 175 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 EGFL6Q8IUX8 553 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLC35F2Q8IXU6 374 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZPLD1Q8TCW7 415 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 TCTEX1D2Q8WW35 142 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 HTR3CQ8WXA8 447 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 FBXO32Q969P5 355 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 FGGYQ96C11 551 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 TUBGCP3Q96CW5 907 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLC25A38Q96DW6 304 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 OXGR1Q96P68 337 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 RBM14Q96PK6 669 aaKnown RBP2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLC39A3Q9BRY0 314 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 ROPN1BQ9BZX4 212 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 PNNQ9H307 717 aaKnown RBP2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 FANCFQ9NPI8 374 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLC7A10Q9NS82 523 aa2.28□□□□□ -2.04
HMGB1P27-201ENST00000431429 DCDC2Q9UHG0 476 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms