RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TP53I3Q53FA7 332 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 C1orf189Q5VU69 101 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 AGAP6Q5VW22 663 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 RHBDD2Q6NTF9 364 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 GHSRQ92847 366 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 OMA1Q96E52 524 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 KTI12Q96EK9 354 aaPredicted RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 AGAP4Q96P64 663 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 GAL3ST4Q96RP7 486 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 DPYSL5Q9BPU6 564 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 TTYH2Q9BSA4 534 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 C11orf54Q9H0W9 315 aaPredicted RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 ZCCHC4Q9H5U6 513 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 B3GAT2Q9NPZ5 323 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 NANSQ9NR45 359 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 INIPQ9NRY2 104 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 PCDHGB7Q9Y5F8 929 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 ADAMTS9Q9P2N4 1935 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 C17orf51A8MQB3 221 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 PRR32B1ATL7 298 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 MAGEB4O15481 346 aaPredicted RBP12.69□□□□□ -0.38
HOXC4-202ENST00000430889 FADS1O60427 444 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 SELENOFO60613 162 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 DCNP07585 359 aaKnown RBP12.69□□□□□ -0.38
HOXC4-202ENST00000430889 ANKRD34CP0C6C1 535 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 ABCD3P28288 659 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
HOXC4-202ENST00000430889 SDHAP31040 664 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 HOXA6P31267 233 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 ACVR1BP36896 505 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 CCR4P51679 360 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 NR0B1P51843 470 aaKnown RBP12.69□□□□□ -0.38
HOXC4-202ENST00000430889 TPTEP56180 551 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 CBX3Q13185 183 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 TAB1Q15750 504 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 CCDC58Q4VC31 144 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 ACSM3Q53FZ2 586 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 PYDC2Q56P42 97 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 TMEM71Q6P5X7 295 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 LANCL3Q6ZV70 420 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 CEACAM19Q7Z692 300 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 RDH10Q8IZV5 341 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 TAAR8Q969N4 342 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 SEMA4CQ9C0C4 833 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 CCDC86Q9H6F5 360 aaKnown RBP12.69□□□□□ -0.38
HOXC4-202ENST00000430889 FKRPQ9H9S5 495 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
HOXC4-202ENST00000430889 CDC14CA4D256 554 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 WISP1O95388 367 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 UCHL1P09936 223 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 FAM157BP0CG42 384 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 ELK1P19419 428 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 IL12BP29460 328 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 HTR3AP46098 478 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 OR10A3P58181 314 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 SIRPAP78324 504 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 RPL18Q07020 188 aaKnown RBP12.68□□□□□ -0.38
HOXC4-202ENST00000430889 TOMM34Q15785 309 aaPredicted RBP12.68□□□□□ -0.38
HOXC4-202ENST00000430889 ALG10Q5BKT4 473 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 EMC4Q5J8M3 183 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 RPL22L1Q6P5R6 122 aaKnown RBP12.68□□□□□ -0.38
HOXC4-202ENST00000430889 LEG1Q6P5S2 330 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 LYPD4Q6UWN0 246 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 MARCH3Q86UD3 253 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 AKAP14Q86UN6 197 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 LSM14AQ8ND56 463 aaKnown RBP12.68□□□□□ -0.38
HOXC4-202ENST00000430889 OR13C5Q8NGS8 318 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 ZC3HAV1LQ96H79 300 aaKnown RBP12.68□□□□□ -0.38
HOXC4-202ENST00000430889 DEPDC7Q96QD5 511 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 KCNJ15Q99712 375 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 ALG12Q9BV10 488 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 PTDSS2Q9BVG9 487 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 SLC22A4Q9H015 551 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.68□□□□□ -0.38
HOXC4-202ENST00000430889 ADAM30Q9UKF2 790 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 MKL2Q9ULH7 1088 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 SRPK3Q9UPE1 567 aa12.68□□□□□ -0.38
HOXC4-202ENST00000430889 BLOC1S5-TXNDC5H3BN57 136 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 CDC40O60508 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
HOXC4-202ENST00000430889 NPIPB7O75200 414 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 ONECUT2O95948 504 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 RPS5P46782 204 aaKnown RBP12.67□□□□□ -0.38
HOXC4-202ENST00000430889 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
HOXC4-202ENST00000430889 GBX2P52951 348 aaPredicted RBP12.67□□□□□ -0.38
HOXC4-202ENST00000430889 OR2B6P58173 313 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 CTXN1P60606 82 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 PLCXD2Q0VAA5 305 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 MESTQ5EB52 335 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 CEP78Q5JTW2 689 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 PAMR1Q6UXH9 720 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 SLC29A4Q7RTT9 530 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 RABEPKQ7Z6M1 372 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 EGFL6Q8IUX8 553 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 PRSS58Q8IYP2 241 aa12.67□□□□□ -0.38
HOXC4-202ENST00000430889 NFAM1Q8NET5 270 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms