RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 PSPHP78330 225 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 C19orf57Q0VDD7 668 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 ELOA3BQ3SY89 546 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 TRIQKQ629K1 86 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 NIPAL3Q6P499 406 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 ZNF322Q6U7Q0 402 aaPredicted RBP7.65□□□□□ -1.18
CD44-208ENST00000428726 PLET1Q6UQ28 207 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 C19orf18Q8NEA5 215 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 ELOA3Q8NG57 546 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 GRPEL2Q8TAA5 225 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 ADAMTS18Q8TE60 1221 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 CCDC32Q9BV29 185 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 NUDT9Q9BW91 350 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 GTPBP2Q9BX10 602 aaKnown RBP7.65□□□□□ -1.18
CD44-208ENST00000428726 SEMA4CQ9C0C4 833 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 WDR76Q9H967 626 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 CUTCQ9NTM9 273 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 MED17Q9NVC6 651 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 EXTL2Q9UBQ6 330 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 COLQQ9Y215 455 aaPredicted RBP7.65□□□□□ -1.18
CD44-208ENST00000428726 HS3ST3A1Q9Y663 406 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 A0A087WV62 115 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 B4DXG7 233 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 ERVH48-1M5A8F1 160 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 PLA2G10O15496 165 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 ATP1B1P05026 303 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 ELK1P19419 428 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 SSTR2P30874 369 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 EVI2BP34910 448 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 CDKN2AP42771 156 aaKnown RBP7.65□□□□□ -1.19
CD44-208ENST00000428726 RAB38P57729 211 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 CTXN1P60606 82 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 GALK2Q01415 458 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 SCN1BQ07699 218 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 GRM7Q14831 915 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 ELOCQ15369 112 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 BTBD16Q32M84 506 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 GUSBP11Q6P575 273 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 ZCCHC12Q6PEW1 402 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 PLXDC2Q6UX71 529 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 RFPL4BQ6ZWI9 263 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 GALNT6Q8NCL4 622 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 OR51A4Q8NGJ6 313 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 SLX1AQ9BQ83 275 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 ARHGAP9Q9BRR9 750 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 SRRQ9GZT4 340 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 RNF32Q9H0A6 362 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 SYT4Q9H2B2 425 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 C8orf33Q9H7E9 229 aaPredicted RBP7.65□□□□□ -1.19
CD44-208ENST00000428726 ZMAT3Q9HA38 289 aaKnown RBP7.65□□□□□ -1.19
CD44-208ENST00000428726 SATB2Q9UPW6 733 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 CLDN16Q9Y5I7 305 aa7.65□□□□□ -1.19
CD44-208ENST00000428726 MN1Q10571 1320 aaPredicted RBP7.65□□□□□ -1.19
CD44-208ENST00000428726 FER1L5A0AVI2 2057 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 KIR2DS5A0A0G2JLQ3 304 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 A0A0G2JNG1 304 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 FAM86C2PA6NEL3 165 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 ZSCAN5BA6NJL1 495 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 H0YC42 278 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 KIR2DS3K7RE56 304 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 BHLHE40O14503 412 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 KLF4O43474 513 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 IL1AP01583 271 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 HMGN1P05114 100 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 HLA-DOBP13765 273 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 EDNRAP25101 427 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 TACR3P29371 465 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 CAPZBP47756 277 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 TPBGQ13641 420 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 KIR2DS5Q14953 304 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.64□□□□□ -1.19
CD44-208ENST00000428726 GLYR1Q49A26 553 aaPredicted RBP7.64□□□□□ -1.19
CD44-208ENST00000428726 PHF19Q5T6S3 580 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 PRAMEF20Q5VT98 475 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 CORO6Q6QEF8 472 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 MEPCEQ7L2J0 689 aaKnown RBP7.64□□□□□ -1.19
CD44-208ENST00000428726 DPY19L4Q7Z388 723 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 GPR135Q8IZ08 494 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 MAFAQ8NHW3 353 aaPredicted RBP7.64□□□□□ -1.19
CD44-208ENST00000428726 PTPMT1Q8WUK0 201 aaPredicted RBP7.64□□□□□ -1.19
CD44-208ENST00000428726 VSTM2LQ96N03 204 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 FRMD6Q96NE9 622 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 TIMP4Q99727 224 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 COQ7Q99807 217 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 TRIM2Q9C040 744 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 DUSP22Q9NRW4 184 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 FGF21Q9NSA1 209 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 TRAPPC4Q9Y296 219 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 RPH3AQ9Y2J0 694 aaPredicted RBP7.64□□□□□ -1.19
CD44-208ENST00000428726 KLHDC2Q9Y2U9 406 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 ICE1Q9Y2F5 2266 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 IQCMA0A1B0GVH7 501 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 AK1P00568 194 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 MAS1P04201 325 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 EIF4EP06730 217 aaKnown RBP7.64□□□□□ -1.19
CD44-208ENST00000428726 SLC35E2P0CK97 266 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 SPINK2P20155 84 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 MST1P26927 711 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 UQCRC1P31930 480 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 ADH7P40394 386 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms