RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 POU3F1Q03052 451 aaPredicted RBP5.34□□□□□ -1.56
HERC4-206ENST00000427635 NPY5RQ15761 445 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 ZNF628Q5EBL2 1059 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 DND1Q8IYX4 353 aaKnown RBP5.34□□□□□ -1.56
HERC4-206ENST00000427635 FADS6Q8N9I5 356 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 OR10AD1Q8NGE0 317 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 SPPL3Q8TCT6 385 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 CHODLQ9H9P2 273 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 BCO1Q9HAY6 547 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 CHST11Q9NPF2 352 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 LANCL2Q9NS86 450 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 OLAHQ9NV23 265 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 ANKRD10Q9NXR5 420 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 SLC22A7Q9Y694 548 aa5.34□□□□□ -1.56
HERC4-206ENST00000427635 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 A0A1W2PP18 115 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 NCBP2LA6PVI3 153 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 SOBPA7XYQ1 873 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 H3BMQ9 156 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 M0R296 226 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 CTDSP2O14595 271 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 DEGS1O15121 323 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PPIHO43447 177 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 PRAMEF4O60810 478 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 DNASE1P24855 282 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 FKBP2P26885 142 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 CDC34P49427 236 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 GNG10P50151 68 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 GDF10P55107 478 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 NDUFA6P56556 154 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SNTB1Q13884 538 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 DEGS2Q6QHC5 323 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 C15orf39Q6ZRI6 1047 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TMEM104Q8NE00 496 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 STK35Q8TDR2 534 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 C10orf82Q8WW14 230 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TCEAL4Q96EI5 215 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SCRN2Q96FV2 425 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SLC41A2Q96JW4 573 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SLC35E1Q96K37 410 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 RIMS4Q9H426 269 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 FN3KRPQ9HA64 309 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SLCO1B3Q9NPD5 702 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ISYNA1Q9NPH2 558 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 C1GALT1Q9NS00 363 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZNF705EA8MWA4 302 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 HCRTO43612 131 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 MITFO75030 526 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 DIRAS1O95057 198 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 RETP07949 1114 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 H2AFB2P0C5Z0 115 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 METTL15P1P0C7V9 234 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PYCR1P32322 319 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SERPINF1P36955 418 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 FABP6P51161 128 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 BAXQ07812 192 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZNF252P-AS1Q0IIN9 211 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 LRRC10Q5BKY1 277 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 RNLSQ5VYX0 342 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 KDM4DQ6B0I6 523 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PLBD1Q6P4A8 553 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TSPAN33Q86UF1 283 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 GCNT2Q8N0V5 402 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 OR8J3Q8NGG0 315 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ADAMTS16Q8TE57 1224 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZNF516Q92618 1163 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 CDS1Q92903 461 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 AURKBQ96GD4 344 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 KLF16Q9BXK1 252 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 IKZF4Q9H2S9 585 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 NOX3Q9HBY0 568 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 HSFX1Q9UBD0 423 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 RBMX2Q9Y388 322 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 A0A1B0GV50 99 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PRKYO43930 277 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TNFRSF6BO95407 300 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 RPA2P15927 270 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ELAVL4P26378 380 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 GABRA4P48169 554 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 FHITP49789 147 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 RAB41Q5JT25 222 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 CST9LP1Q5W188 147 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 VASNQ6EMK4 673 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 FAM83HQ6ZRV2 1179 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 PARS2Q7L3T8 475 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 UMODL1-AS1Q8N2C9 162 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SIRT6Q8N6T7 355 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 UBAC2Q8NBM4 344 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZNF417Q8TAU3 575 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 GPR148Q8TDV2 347 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SLC38A5Q8WUX1 472 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PFDN5Q99471 154 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PSD2Q9BQI7 771 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 HDAC8Q9BY41 377 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 C1orf198Q9H425 327 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 FGF21Q9NSA1 209 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZNF443Q9Y2A4 671 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 KCNMB2Q9Y691 235 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 MRC1P22897 1456 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms